RNA–Protein interactions for RNA: ENST00000570473.5

TRIM25-203, Transcript of tripartite motif containing 25, humanhuman

TSL 3

Gene TRIM25, Length 498 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM25-203ENST00000570473 CCDC125Q86Z20 511 aa11.41□□□□□ -0.58
TRIM25-203ENST00000570473 TSPAN18Q96SJ8 248 aa11.41□□□□□ -0.58
TRIM25-203ENST00000570473 E9PSI1 815 aa11.4□□□□□ -0.58
TRIM25-203ENST00000570473 ARID4AP29374 1257 aaPredicted RBP11.4□□□□□ -0.58
TRIM25-203ENST00000570473 ANP32CO43423 234 aa11.39□□□□□ -0.59
TRIM25-203ENST00000570473 PAK3O75914 559 aaPredicted RBP11.39□□□□□ -0.59
TRIM25-203ENST00000570473 SEMA3FQ13275 785 aa11.39□□□□□ -0.59
TRIM25-203ENST00000570473 RIPOR2Q9Y4F9 1068 aa11.39□□□□□ -0.59
TRIM25-203ENST00000570473 VGLL3A8MV65 326 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 LMOD3Q0VAK6 560 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 MTA1Q13330 715 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 FAM9BQ8IZU0 186 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 SDR16C5Q8N3Y7 309 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 BANK1Q8NDB2 785 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 FAM210AQ96ND0 272 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 MTMR7Q9Y216 660 aa11.38□□□□□ -0.59
TRIM25-203ENST00000570473 CFAP65Q6ZU64 1925 aaKnown RBP11.38□□□□□ -0.59
TRIM25-203ENST00000570473 MSL3Q8N5Y2 521 aaKnown RBP11.37□□□□□ -0.59
TRIM25-203ENST00000570473 ANKRD23Q86SG2 305 aa11.36□□□□□ -0.59
TRIM25-203ENST00000570473 ZNF500O60304 480 aaPredicted RBP11.35□□□□□ -0.59
TRIM25-203ENST00000570473 NEFHP12036 1026 aa11.35□□□□□ -0.59
TRIM25-203ENST00000570473 CTR9Q6PD62 1173 aa11.35□□□□□ -0.59
TRIM25-203ENST00000570473 MYH16Q9H6N6 1097 aa11.35□□□□□ -0.59
TRIM25-203ENST00000570473 RRAGDQ9NQL2 400 aaPredicted RBP11.35□□□□□ -0.59
TRIM25-203ENST00000570473 MRVI1Q9Y6F6 885 aa11.35□□□□□ -0.59
TRIM25-203ENST00000570473 CADPSQ9ULU8 1353 aa11.35□□□□□ -0.59
TRIM25-203ENST00000570473 PAIP2Q9BPZ3 127 aaKnown RBP11.34□□□□□ -0.59
TRIM25-203ENST00000570473 KIF1CO43896 1103 aaKnown RBP11.33□□□□□ -0.6
TRIM25-203ENST00000570473 ZHX1Q9UKY1 873 aaPredicted RBP11.33□□□□□ -0.6
TRIM25-203ENST00000570473 CEP83Q9Y592 693 aa11.33□□□□□ -0.6
TRIM25-203ENST00000570473 SNRNP27Q8WVK2 155 aaKnown RBP11.32□□□□□ -0.6
TRIM25-203ENST00000570473 SGSM3Q96HU1 749 aa11.32□□□□□ -0.6
TRIM25-203ENST00000570473 IRF6O14896 467 aa11.31□□□□□ -0.6
TRIM25-203ENST00000570473 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
TRIM25-203ENST00000570473 NBPF3Q9H094 633 aa11.31□□□□□ -0.6
TRIM25-203ENST00000570473 ZRANB2O95218 330 aaKnown RBP eCLIP11.3□□□□□ -0.67e-8■■□□□ 14.3
TRIM25-203ENST00000570473 ITFG2Q969R8 447 aa11.3□□□□□ -0.6
TRIM25-203ENST00000570473 MYCBPQ99417 103 aaPredicted RBP11.3□□□□□ -0.6
TRIM25-203ENST00000570473 ESPNB1AK53 854 aa11.29□□□□□ -0.6
TRIM25-203ENST00000570473 MAPK8IP2Q13387 824 aaPredicted RBP11.29□□□□□ -0.6
TRIM25-203ENST00000570473 MNS1Q8NEH6 495 aa11.29□□□□□ -0.6
TRIM25-203ENST00000570473 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
TRIM25-203ENST00000570473 IGF1RP08069 1367 aa11.28□□□□□ -0.6
TRIM25-203ENST00000570473 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
TRIM25-203ENST00000570473 TMCO4Q5TGY1 634 aa11.27□□□□□ -0.61
TRIM25-203ENST00000570473 NOL8Q76FK4 1167 aaKnown RBP11.27□□□□□ -0.61
TRIM25-203ENST00000570473 FRAT1Q92837 279 aaPredicted RBP11.27□□□□□ -0.61
TRIM25-203ENST00000570473 CCDC94Q9BW85 323 aaPredicted RBP11.27□□□□□ -0.61
TRIM25-203ENST00000570473 EEA1Q15075 1411 aa11.26□□□□□ -0.61
TRIM25-203ENST00000570473 KIF3CO14782 793 aa11.26□□□□□ -0.61
TRIM25-203ENST00000570473 CCDC172P0C7W6 258 aa11.26□□□□□ -0.61
TRIM25-203ENST00000570473 ANKRD13AQ8IZ07 590 aa11.26□□□□□ -0.61
TRIM25-203ENST00000570473 ZNF428Q96B54 188 aa11.26□□□□□ -0.61
TRIM25-203ENST00000570473 HIRIP3Q9BW71 556 aaPredicted RBP11.26□□□□□ -0.61
TRIM25-203ENST00000570473 ZRSR2Q15696 482 aaKnown RBP11.25□□□□□ -0.61
TRIM25-203ENST00000570473 GORABQ5T7V8 394 aa11.25□□□□□ -0.61
TRIM25-203ENST00000570473 BRMS1Q9HCU9 246 aa11.25□□□□□ -0.61
TRIM25-203ENST00000570473 CEP126Q9P2H0 1117 aa11.25□□□□□ -0.61
TRIM25-203ENST00000570473 ISY1Q9ULR0 285 aaKnown RBP11.25□□□□□ -0.61
TRIM25-203ENST00000570473 UNC13AQ9UPW8 1703 aa11.24□□□□□ -0.61
TRIM25-203ENST00000570473 NME8Q8N427 588 aa11.24□□□□□ -0.61
TRIM25-203ENST00000570473 NGEFQ8N5V2 710 aa11.24□□□□□ -0.61
TRIM25-203ENST00000570473 ARHGEF1Q92888 912 aaKnown RBP11.24□□□□□ -0.61
TRIM25-203ENST00000570473 LIG1P18858 919 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 MFAP1P55081 439 aaKnown RBP11.23□□□□□ -0.61
TRIM25-203ENST00000570473 BRPF1P55201 1214 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-203ENST00000570473 UVSSAQ2YD98 709 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 CDCA8Q53HL2 280 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-203ENST00000570473 ARMCX6Q7L4S7 300 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
TRIM25-203ENST00000570473 NCAPGQ9BPX3 1015 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 MTA3Q9BTC8 594 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 ANAPC4Q9UJX5 808 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 KNSTRNQ9Y448 316 aa11.23□□□□□ -0.61
TRIM25-203ENST00000570473 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.22□□□□□ -0.61
TRIM25-203ENST00000570473 KIF16BQ96L93 1317 aa11.22□□□□□ -0.61
TRIM25-203ENST00000570473 DYNC1I1O14576 645 aa11.21□□□□□ -0.61
TRIM25-203ENST00000570473 IRX5P78411 483 aaPredicted RBP11.21□□□□□ -0.61
TRIM25-203ENST00000570473 WDR78Q5VTH9 848 aa11.21□□□□□ -0.61
TRIM25-203ENST00000570473 CXorf38Q8TB03 319 aa11.21□□□□□ -0.61
TRIM25-203ENST00000570473 SMC4Q9NTJ3 1288 aa11.21□□□□□ -0.61
TRIM25-203ENST00000570473 ZNF853P0CG23 659 aa11.2□□□□□ -0.62
TRIM25-203ENST00000570473 CDC37Q16543 378 aaPredicted RBP11.2□□□□□ -0.62
TRIM25-203ENST00000570473 CSPP1Q1MSJ5 1256 aa11.2□□□□□ -0.62
TRIM25-203ENST00000570473 KIF3AQ9Y496 699 aa11.2□□□□□ -0.62
TRIM25-203ENST00000570473 NINLQ9Y2I6 1382 aa11.19□□□□□ -0.62
TRIM25-203ENST00000570473 FOXD4L6Q3SYB3 417 aaPredicted RBP11.19□□□□□ -0.62
TRIM25-203ENST00000570473 FOXD4L3Q6VB84 417 aaPredicted RBP11.19□□□□□ -0.62
TRIM25-203ENST00000570473 DDX46Q7L014 1031 aaKnown RBP11.19□□□□□ -0.62
TRIM25-203ENST00000570473 CREBRFQ8IUR6 639 aa11.19□□□□□ -0.62
TRIM25-203ENST00000570473 ZNF513Q8N8E2 541 aaPredicted RBP11.19□□□□□ -0.62
TRIM25-203ENST00000570473 HELBQ8NG08 1087 aaPredicted RBP11.19□□□□□ -0.62
TRIM25-203ENST00000570473 RNF217Q8TC41 542 aa11.19□□□□□ -0.62
TRIM25-203ENST00000570473 UBA5Q9GZZ9 404 aa11.19□□□□□ -0.62
TRIM25-203ENST00000570473 C1orf115Q9H7X2 142 aa11.19□□□□□ -0.62
TRIM25-203ENST00000570473 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
TRIM25-203ENST00000570473 RAD50Q92878 1312 aa11.18□□□□□ -0.62
TRIM25-203ENST00000570473 CTAGE5O15320 804 aa11.18□□□□□ -0.62
TRIM25-203ENST00000570473 TPD52L2O43399 206 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms