RNA–Protein interactions for RNA: ENST00000508579.5

CAST-222, Transcript of calpastatin, humanhuman

TSL 2 BASIC

Gene CAST, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-222ENST00000508579 SGSM3Q96HU1 749 aa10.75□□□□□ -0.69
CAST-222ENST00000508579 GOLIM4O00461 696 aa10.75□□□□□ -0.69
CAST-222ENST00000508579 CALRP27797 417 aaKnown RBP10.75□□□□□ -0.69
CAST-222ENST00000508579 CCDC96Q2M329 555 aa10.75□□□□□ -0.69
CAST-222ENST00000508579 BSDC1Q9NW68 430 aaPredicted RBP10.75□□□□□ -0.69
CAST-222ENST00000508579 DDRGK1Q96HY6 314 aa10.74□□□□□ -0.69
CAST-222ENST00000508579 VGLL3A8MV65 326 aa10.73□□□□□ -0.69
CAST-222ENST00000508579 SEMA3FQ13275 785 aa10.73□□□□□ -0.69
CAST-222ENST00000508579 RAI14Q9P0K7 980 aa10.73□□□□□ -0.69
CAST-222ENST00000508579 BRPF1P55201 1214 aaPredicted RBP10.72□□□□□ -0.69
CAST-222ENST00000508579 TMCO4Q5TGY1 634 aa10.72□□□□□ -0.69
CAST-222ENST00000508579 MTERF4Q7Z6M4 381 aaKnown RBP10.72□□□□□ -0.69
CAST-222ENST00000508579 PNNQ9H307 717 aaKnown RBP10.72□□□□□ -0.69
CAST-222ENST00000508579 DMTNQ08495 405 aa10.72□□□□□ -0.69
CAST-222ENST00000508579 MYBPC2Q14324 1141 aa10.72□□□□□ -0.69
CAST-222ENST00000508579 NBPF6Q5VWK0 638 aa10.72□□□□□ -0.69
CAST-222ENST00000508579 NBPF10Q6P3W6 841 aaKnown RBP10.72□□□□□ -0.69
CAST-222ENST00000508579 NBPF5PQ86XG9 351 aaPredicted RBP10.72□□□□□ -0.69
CAST-222ENST00000508579 NBPF4Q96M43 638 aa10.72□□□□□ -0.69
CAST-222ENST00000508579 HDAC1Q13547 482 aaPredicted RBP10.71□□□□□ -0.69
CAST-222ENST00000508579 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.71□□□□□ -0.69
CAST-222ENST00000508579 ARID4AP29374 1257 aaPredicted RBP10.7□□□□□ -0.7
CAST-222ENST00000508579 MKL1Q969V6 931 aa10.7□□□□□ -0.7
CAST-222ENST00000508579 GSE1Q14687 1217 aa10.7□□□□□ -0.7
CAST-222ENST00000508579 CDCA8Q53HL2 280 aa10.7□□□□□ -0.7
CAST-222ENST00000508579 NOL8Q76FK4 1167 aaKnown RBP10.7□□□□□ -0.7
CAST-222ENST00000508579 MYH16Q9H6N6 1097 aa10.7□□□□□ -0.7
CAST-222ENST00000508579 RBM28Q9NW13 759 aaKnown RBP10.7□□□□□ -0.7
CAST-222ENST00000508579 LETM1O95202 739 aaPredicted RBP10.69□□□□□ -0.7
CAST-222ENST00000508579 MFAP1P55081 439 aaKnown RBP10.69□□□□□ -0.7
CAST-222ENST00000508579 MAP2K1Q02750 393 aaPredicted RBP10.69□□□□□ -0.7
CAST-222ENST00000508579 FOXD4L6Q3SYB3 417 aaPredicted RBP10.69□□□□□ -0.7
CAST-222ENST00000508579 FOXD4L3Q6VB84 417 aaPredicted RBP10.69□□□□□ -0.7
CAST-222ENST00000508579 ERCC3P19447 782 aa10.68□□□□□ -0.7
CAST-222ENST00000508579 ZKSCAN8Q15776 578 aaPredicted RBP10.68□□□□□ -0.7
CAST-222ENST00000508579 TSPAN18Q96SJ8 248 aa10.68□□□□□ -0.7
CAST-222ENST00000508579 GTPBP4Q9BZE4 634 aaKnown RBP10.68□□□□□ -0.7
CAST-222ENST00000508579 ANP32CO43423 234 aa10.67□□□□□ -0.7
CAST-222ENST00000508579 SATB1Q01826 763 aa10.67□□□□□ -0.7
CAST-222ENST00000508579 FEZ2Q9UHY8 353 aaPredicted RBP10.67□□□□□ -0.7
CAST-222ENST00000508579 IRF6O14896 467 aa10.66□□□□□ -0.7
CAST-222ENST00000508579 CLCN1P35523 988 aa10.66□□□□□ -0.7
CAST-222ENST00000508579 SDR16C5Q8N3Y7 309 aa10.66□□□□□ -0.7
CAST-222ENST00000508579 ZNF500O60304 480 aaPredicted RBP10.65□□□□□ -0.7
CAST-222ENST00000508579 NUB1Q9Y5A7 615 aa10.65□□□□□ -0.71
CAST-222ENST00000508579 MTA1Q13330 715 aa10.62□□□□□ -0.71
CAST-222ENST00000508579 ARMCX6Q7L4S7 300 aa10.62□□□□□ -0.71
CAST-222ENST00000508579 MIER1Q8N108 512 aa10.62□□□□□ -0.71
CAST-222ENST00000508579 BANK1Q8NDB2 785 aa10.62□□□□□ -0.71
CAST-222ENST00000508579 HMGB1P1B2RPK0 211 aaPredicted RBP10.62□□□□□ -0.71
CAST-222ENST00000508579 BRD1O95696 1058 aa10.62□□□□□ -0.71
CAST-222ENST00000508579 ANKRD13AQ8IZ07 590 aa10.62□□□□□ -0.71
CAST-222ENST00000508579 NME8Q8N427 588 aa10.62□□□□□ -0.71
CAST-222ENST00000508579 MSL3Q8N5Y2 521 aaKnown RBP10.62□□□□□ -0.71
CAST-222ENST00000508579 LMOD3Q0VAK6 560 aa10.61□□□□□ -0.71
CAST-222ENST00000508579 GORABQ5T7V8 394 aa10.61□□□□□ -0.71
CAST-222ENST00000508579 ANKRD23Q86SG2 305 aa10.61□□□□□ -0.71
CAST-222ENST00000508579 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
CAST-222ENST00000508579 ZHX1Q9UKY1 873 aaPredicted RBP10.61□□□□□ -0.71
CAST-222ENST00000508579 TSPYL1Q9H0U9 437 aa10.6□□□□□ -0.71
CAST-222ENST00000508579 ZBTB47Q9UFB7 747 aaPredicted RBP10.6□□□□□ -0.71
CAST-222ENST00000508579 ARID3CA6NKF2 412 aa10.6□□□□□ -0.71
CAST-222ENST00000508579 IPO9Q96P70 1041 aaKnown RBP10.6□□□□□ -0.71
CAST-222ENST00000508579 MRVI1Q9Y6F6 885 aa10.6□□□□□ -0.71
CAST-222ENST00000508579 TPD52L2O43399 206 aaKnown RBP10.59□□□□□ -0.71
CAST-222ENST00000508579 NGEFQ8N5V2 710 aa10.59□□□□□ -0.71
CAST-222ENST00000508579 MTA3Q9BTC8 594 aa10.58□□□□□ -0.72
CAST-222ENST00000508579 TERF1P54274 439 aa10.57□□□□□ -0.72
CAST-222ENST00000508579 TRAIPQ9BWF2 469 aa10.57□□□□□ -0.72
CAST-222ENST00000508579 DNAJC5Q9H3Z4 198 aa10.57□□□□□ -0.72
CAST-222ENST00000508579 APBB1O00213 710 aa10.57□□□□□ -0.72
CAST-222ENST00000508579 POLD1P28340 1107 aa10.57□□□□□ -0.72
CAST-222ENST00000508579 RBM26Q5T8P6 1007 aaKnown RBP10.56□□□□□ -0.72
CAST-222ENST00000508579 HAX1O00165 279 aa10.55□□□□□ -0.72
CAST-222ENST00000508579 MPNDQ8N594 471 aa10.55□□□□□ -0.72
CAST-222ENST00000508579 ARHGEF1Q92888 912 aaKnown RBP10.55□□□□□ -0.72
CAST-222ENST00000508579 CCER2I3L3R5 266 aa10.54□□□□□ -0.72
CAST-222ENST00000508579 APBB1IPQ7Z5R6 666 aaPredicted RBP10.54□□□□□ -0.72
CAST-222ENST00000508579 PAIP2Q9BPZ3 127 aaKnown RBP10.54□□□□□ -0.72
CAST-222ENST00000508579 PAK3O75914 559 aaPredicted RBP10.54□□□□□ -0.72
CAST-222ENST00000508579 ZRANB2O95218 330 aaKnown RBP eCLIP10.54□□□□□ -0.72
CAST-222ENST00000508579 ZNF513Q8N8E2 541 aaPredicted RBP10.54□□□□□ -0.72
CAST-222ENST00000508579 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
CAST-222ENST00000508579 KRBA2Q6ZNG9 492 aa10.53□□□□□ -0.72
CAST-222ENST00000508579 EFCC1Q9HA90 598 aa10.53□□□□□ -0.72
CAST-222ENST00000508579 CEP83Q9Y592 693 aa10.53□□□□□ -0.72
CAST-222ENST00000508579 IGF1RP08069 1367 aa10.52□□□□□ -0.72
CAST-222ENST00000508579 GZF1Q9H116 711 aaPredicted RBP10.52□□□□□ -0.72
CAST-222ENST00000508579 RRAGDQ9NQL2 400 aaPredicted RBP10.52□□□□□ -0.72
CAST-222ENST00000508579 PLSCR2Q9NRY7 297 aa10.52□□□□□ -0.72
CAST-222ENST00000508579 GOLGA6CA6NDK9 693 aa10.52□□□□□ -0.73
CAST-222ENST00000508579 GOLGA6BA6NDN3 693 aa10.52□□□□□ -0.73
CAST-222ENST00000508579 MARCH6O60337 910 aa10.52□□□□□ -0.73
CAST-222ENST00000508579 GOLGA6DP0CG33 693 aa10.52□□□□□ -0.73
CAST-222ENST00000508579 ZRSR2Q15696 482 aaKnown RBP10.52□□□□□ -0.73
CAST-222ENST00000508579 DDX46Q7L014 1031 aaKnown RBP10.52□□□□□ -0.73
CAST-222ENST00000508579 ITFG2Q969R8 447 aa10.52□□□□□ -0.73
CAST-222ENST00000508579 GOLGA6AQ9NYA3 693 aa10.52□□□□□ -0.73
CAST-222ENST00000508579 POLA2Q14181 598 aa10.51□□□□□ -0.73
CAST-222ENST00000508579 CXorf38Q8TB03 319 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms