RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 TRIM67Q6ZTA4 783 aa10.89□□□□□ -0.67
COPA-204ENST00000481522 GPHNQ9NQX3 736 aaPredicted RBP10.89□□□□□ -0.67
COPA-204ENST00000481522 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
COPA-204ENST00000481522 WIPF1O43516 503 aa10.87□□□□□ -0.67
COPA-204ENST00000481522 TSR3Q9UJK0 312 aaKnown RBP10.87□□□□□ -0.67
COPA-204ENST00000481522 TAOK2Q9UL54 1235 aa10.87□□□□□ -0.67
COPA-204ENST00000481522 HPS5Q9UPZ3 1129 aa10.85□□□□□ -0.67
COPA-204ENST00000481522 WFS1O76024 890 aa10.84□□□□□ -0.67
COPA-204ENST00000481522 SUZ12Q15022 739 aaKnown RBP10.84□□□□□ -0.67
COPA-204ENST00000481522 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.84□□□□□ -0.67
COPA-204ENST00000481522 INSM1Q01101 510 aaPredicted RBP10.83□□□□□ -0.68
COPA-204ENST00000481522 UPF1Q92900 1129 aaKnown RBP eCLIP10.83□□□□□ -0.68
COPA-204ENST00000481522 DGAT1O75907 488 aa10.82□□□□□ -0.68
COPA-204ENST00000481522 COL9A1P20849 921 aa10.82□□□□□ -0.68
COPA-204ENST00000481522 PKDCCQ504Y2 493 aa10.82□□□□□ -0.68
COPA-204ENST00000481522 ANO8Q9HCE9 1232 aaPredicted RBP10.82□□□□□ -0.68
COPA-204ENST00000481522 KIAA1468Q9P260 1216 aa10.79□□□□□ -0.68
COPA-204ENST00000481522 SEPT9Q9UHD8 586 aaPredicted RBP10.79□□□□□ -0.68
COPA-204ENST00000481522 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.78□□□□□ -0.68
COPA-204ENST00000481522 NFX1Q12986 1120 aaKnown RBP10.77□□□□□ -0.69
COPA-204ENST00000481522 STK25O00506 426 aa10.75□□□□□ -0.69
COPA-204ENST00000481522 LRCH3Q96II8 777 aa10.75□□□□□ -0.69
COPA-204ENST00000481522 MTRQ99707 1265 aa10.75□□□□□ -0.69
COPA-204ENST00000481522 LCE2CQ5TA81 110 aa10.74□□□□□ -0.69
COPA-204ENST00000481522 IL21Q9HBE4 155 aa10.73□□□□□ -0.69
COPA-204ENST00000481522 FAM98CQ17RN3 349 aaKnown RBP10.72□□□□□ -0.69
COPA-204ENST00000481522 ST8SIA5O15466 376 aa10.7□□□□□ -0.7
COPA-204ENST00000481522 ONECUT3O60422 494 aaPredicted RBP10.7□□□□□ -0.7
COPA-204ENST00000481522 ZNF516Q92618 1163 aa10.7□□□□□ -0.7
COPA-204ENST00000481522 AAASQ9NRG9 546 aa10.69□□□□□ -0.7
COPA-204ENST00000481522 PRR20EP86478 221 aa10.68□□□□□ -0.7
COPA-204ENST00000481522 PRR20CP86479 221 aa10.68□□□□□ -0.7
COPA-204ENST00000481522 PRR20DP86480 221 aa10.68□□□□□ -0.7
COPA-204ENST00000481522 PRR20BP86481 221 aa10.68□□□□□ -0.7
COPA-204ENST00000481522 PRR20AP86496 221 aa10.68□□□□□ -0.7
COPA-204ENST00000481522 EVI5O60447 810 aa10.66□□□□□ -0.7
COPA-204ENST00000481522 EMID1Q96A84 441 aaPredicted RBP10.66□□□□□ -0.7
COPA-204ENST00000481522 ECM2O94769 699 aaPredicted RBP10.65□□□□□ -0.7
COPA-204ENST00000481522 NKX2-3Q8TAU0 364 aa10.65□□□□□ -0.7
COPA-204ENST00000481522 PCDHGA10Q9Y5H3 936 aa10.64□□□□□ -0.71
COPA-204ENST00000481522 FAM187AA6NFU0 413 aa10.63□□□□□ -0.71
COPA-204ENST00000481522 PPP4CP60510 307 aa10.63□□□□□ -0.71
COPA-204ENST00000481522 TRIM6-TRIM34B2RNG4 842 aa10.59□□□□□ -0.71
COPA-204ENST00000481522 TMUB1Q9BVT8 246 aa10.57□□□□□ -0.72
COPA-204ENST00000481522 RGL2O15211 777 aa10.56□□□□□ -0.72
COPA-204ENST00000481522 GGCXP38435 758 aa10.56□□□□□ -0.72
COPA-204ENST00000481522 SLC19A1P41440 591 aa10.56□□□□□ -0.72
COPA-204ENST00000481522 DACH1Q9UI36 760 aa10.56□□□□□ -0.72
COPA-204ENST00000481522 SPRYD7Q5W111 196 aa10.55□□□□□ -0.72
COPA-204ENST00000481522 ZNF598Q86UK7 904 aaKnown RBP10.54□□□□□ -0.72
COPA-204ENST00000481522 GDF9O60383 454 aa10.53□□□□□ -0.72
COPA-204ENST00000481522 GMPR2Q9P2T1 348 aaKnown RBP10.53□□□□□ -0.72
COPA-204ENST00000481522 PKD2Q13563 968 aa10.52□□□□□ -0.73
COPA-204ENST00000481522 PPP1R15BQ5SWA1 713 aa10.52□□□□□ -0.73
COPA-204ENST00000481522 CRIPAKQ8N1N5 446 aa10.52□□□□□ -0.73
COPA-204ENST00000481522 TYW1BQ6NUM6 668 aa10.51□□□□□ -0.73
COPA-204ENST00000481522 FBXW7Q969H0 707 aa10.51□□□□□ -0.73
COPA-204ENST00000481522 LORP23490 312 aaPredicted RBP10.5□□□□□ -0.73
COPA-204ENST00000481522 CRISPLD2Q9H0B8 497 aa10.5□□□□□ -0.73
COPA-204ENST00000481522 TNFRSF10AO00220 468 aa10.49□□□□□ -0.73
COPA-204ENST00000481522 FAM181BA6NEQ2 426 aa10.48□□□□□ -0.73
COPA-204ENST00000481522 C11orf95C9JLR9 678 aaPredicted RBP10.48□□□□□ -0.73
COPA-204ENST00000481522 SAMD7Q7Z3H4 446 aa10.47□□□□□ -0.73
COPA-204ENST00000481522 RNF223E7ERA6 249 aa10.46□□□□□ -0.73
COPA-204ENST00000481522 APLP1P51693 650 aa10.46□□□□□ -0.73
COPA-204ENST00000481522 PHF14O94880 888 aa10.45□□□□□ -0.74
COPA-204ENST00000481522 C6orf132Q5T0Z8 1188 aa10.45□□□□□ -0.74
COPA-204ENST00000481522 ZNF697Q5TEC3 545 aa10.45□□□□□ -0.74
COPA-204ENST00000481522 TERTO14746 1132 aaKnown RBP10.43□□□□□ -0.74
COPA-204ENST00000481522 LIAT1Q6ZQX7 453 aa10.4□□□□□ -0.74
COPA-204ENST00000481522 TSKSQ9UJT2 592 aa10.4□□□□□ -0.74
COPA-204ENST00000481522 AVPP01185 164 aa10.38□□□□□ -0.75
COPA-204ENST00000481522 COPS2P61201 443 aa10.37□□□□□ -0.75
COPA-204ENST00000481522 KRTAP4-8Q9BYQ9 185 aa10.37□□□□□ -0.75
COPA-204ENST00000481522 HS6ST3Q8IZP7 471 aa10.36□□□□□ -0.75
COPA-204ENST00000481522 ZSCAN1Q8NBB4 408 aa10.36□□□□□ -0.75
COPA-204ENST00000481522 MAP3K9P80192 1104 aa10.35□□□□□ -0.75
COPA-204ENST00000481522 ZPR1O75312 459 aa10.34□□□□□ -0.75
COPA-204ENST00000481522 NCKAP5LQ9HCH0 1330 aa10.33□□□□□ -0.76
COPA-204ENST00000481522 SMAPO00193 183 aa10.33□□□□□ -0.76
COPA-204ENST00000481522 PACS2Q86VP3 889 aa10.33□□□□□ -0.76
COPA-204ENST00000481522 ANKLE1Q8NAG6 615 aa10.32□□□□□ -0.76
COPA-204ENST00000481522 AXIN1O15169 862 aa10.31□□□□□ -0.76
COPA-204ENST00000481522 SNRPBP14678 240 aaKnown RBP10.3□□□□□ -0.76
COPA-204ENST00000481522 PKD2L1Q9P0L9 805 aa10.3□□□□□ -0.76
COPA-204ENST00000481522 SMCPP49901 116 aaPredicted RBP10.29□□□□□ -0.76
COPA-204ENST00000481522 EMILIN3Q9NT22 766 aa10.29□□□□□ -0.76
COPA-204ENST00000481522 C3orf80F5H4A9 247 aa10.28□□□□□ -0.76
COPA-204ENST00000481522 CTC1Q2NKJ3 1217 aa10.28□□□□□ -0.76
COPA-204ENST00000481522 XP32Q5T750 250 aa10.28□□□□□ -0.76
COPA-204ENST00000481522 EPAS1Q99814 870 aa10.28□□□□□ -0.76
COPA-204ENST00000481522 PPEF1O14829 653 aaPredicted RBP10.27□□□□□ -0.77
COPA-204ENST00000481522 CHGAP10645 457 aaKnown RBP10.27□□□□□ -0.77
COPA-204ENST00000481522 KCTD17Q8N5Z5 321 aa10.27□□□□□ -0.77
COPA-204ENST00000481522 RYDENQ9NUL5 291 aaKnown RBP10.26□□□□□ -0.77
COPA-204ENST00000481522 GMPRP36959 345 aa10.25□□□□□ -0.77
COPA-204ENST00000481522 GSK3AP49840 483 aa10.25□□□□□ -0.77
COPA-204ENST00000481522 AMER1Q5JTC6 1135 aaPredicted RBP10.25□□□□□ -0.77
COPA-204ENST00000481522 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.24□□□□□ -0.77
COPA-204ENST00000481522 FAM198AQ9UFP1 575 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms