RNA–Protein interactions for RNA: ENST00000458893.1

SNORD42B-201, Transcript of small nucleolar RNA, C/D box 42B, humanhuman

BASIC

Gene SNORD42B, Length 67 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD42B-201ENST00000458893 AAASQ9NRG9 546 aa2.31□□□□□ -2.04
SNORD42B-201ENST00000458893 TERTO14746 1132 aaKnown RBP2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 SLC19A1P41440 591 aa2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 PRR20EP86478 221 aa2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 PRR20CP86479 221 aa2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 PRR20DP86480 221 aa2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 PRR20BP86481 221 aa2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 PRR20AP86496 221 aa2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 PSMG3-AS1Q96PY0 264 aa2.3□□□□□ -2.04
SNORD42B-201ENST00000458893 AXIN1O15169 862 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 TJAP1Q5JTD0 557 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 ZNF598Q86UK7 904 aaKnown RBP2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 PLPP6Q8IY26 295 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 TMEM151AQ8N4L1 468 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 ZDHHC16Q969W1 377 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 MTRQ99707 1265 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 TMUB1Q9BVT8 246 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 KRTAP4-8Q9BYQ9 185 aa2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 GMPR2Q9P2T1 348 aaKnown RBP2.29□□□□□ -2.04
SNORD42B-201ENST00000458893 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 BTBD11A6QL63 1104 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 PPP1R3GB7ZBB8 358 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 TNFRSF10AO00220 468 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 VGFO15240 615 aaPredicted RBP2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 FOSBP53539 338 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 TRIM67Q6ZTA4 783 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 SPOCK2Q92563 424 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 ZFP91Q96JP5 570 aaPredicted RBP2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 KIAA1468Q9P260 1216 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 TAOK2Q9UL54 1235 aa2.28□□□□□ -2.04
SNORD42B-201ENST00000458893 RIOK3O14730 519 aaKnown RBP2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 GDF11O95390 407 aa2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 KCNMA1Q12791 1236 aa2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 FAM98CQ17RN3 349 aaKnown RBP2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 PROX2Q3B8N5 592 aa2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 ZNF697Q5TEC3 545 aa2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 SPRYD7Q5W111 196 aa2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 KRTAP1-3Q8IUG1 177 aa2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 SEPT9Q9UHD8 586 aaPredicted RBP2.27□□□□□ -2.05
SNORD42B-201ENST00000458893 RNF225M0QZC1 329 aaPredicted RBP2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 FOXK1P85037 733 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 CTC1Q2NKJ3 1217 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 CRIPAKQ8N1N5 446 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 FBXO22Q8NEZ5 403 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 UPF1Q92900 1129 aaKnown RBP eCLIP2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 IRF7Q92985 503 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 JPH4Q96JJ6 628 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 ADAM33Q9BZ11 813 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 SENP2Q9HC62 589 aa2.26□□□□□ -2.05
SNORD42B-201ENST00000458893 ONECUT3O60422 494 aaPredicted RBP2.25□□□□□ -2.05
SNORD42B-201ENST00000458893 IGHA1P01876 353 aa2.25□□□□□ -2.05
SNORD42B-201ENST00000458893 VASPP50552 380 aaPredicted RBP2.25□□□□□ -2.05
SNORD42B-201ENST00000458893 HDGFP51858 240 aaKnown RBP2.25□□□□□ -2.05
SNORD42B-201ENST00000458893 ZNF516Q92618 1163 aa2.25□□□□□ -2.05
SNORD42B-201ENST00000458893 DACH1Q9UI36 760 aa2.25□□□□□ -2.05
SNORD42B-201ENST00000458893 KRTAP9-6A0A140TA67 174 aa2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 GMPRP36959 345 aa2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 GPAT2Q6NUI2 795 aa2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 NECTIN2Q92692 538 aa2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 KIFC2Q96AC6 838 aa2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 KRTAP9-2Q9BYQ4 174 aa2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 STK24Q9Y6E0 443 aa2.24□□□□□ -2.05
SNORD42B-201ENST00000458893 GDF9O60383 454 aa2.23□□□□□ -2.05
SNORD42B-201ENST00000458893 RNF40O75150 1001 aa2.23□□□□□ -2.05
SNORD42B-201ENST00000458893 RASSF7Q02833 373 aa2.23□□□□□ -2.05
SNORD42B-201ENST00000458893 NKX2-3Q8TAU0 364 aa2.23□□□□□ -2.05
SNORD42B-201ENST00000458893 MFRPQ9BY79 579 aa2.23□□□□□ -2.05
SNORD42B-201ENST00000458893 BCL11BQ9C0K0 894 aaPredicted RBP2.23□□□□□ -2.05
SNORD42B-201ENST00000458893 GPHNQ9NQX3 736 aaPredicted RBP2.23□□□□□ -2.05
SNORD42B-201ENST00000458893 COPS2P61201 443 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 FOXC1Q12948 553 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 DSG2Q14126 1118 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 LCE3BQ5TA77 95 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 LMOD2Q6P5Q4 547 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 PACS2Q86VP3 889 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 CYP4X1Q8N118 509 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 OXER1Q8TDS5 423 aa2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 NXF1Q9UBU9 619 aaKnown RBP2.22□□□□□ -2.05
SNORD42B-201ENST00000458893 TRIM6-TRIM34B2RNG4 842 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 RNF223E7ERA6 249 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 EVI5O60447 810 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 AVPP01185 164 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 SNRPBP14678 240 aaKnown RBP2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 COL9A1P20849 921 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 SLC4A3P48751 1232 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 SMCPP49901 116 aaPredicted RBP2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 FOXK2Q01167 660 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 LCE2CQ5TA81 110 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 NPAS3Q8IXF0 933 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 ANKLE1Q8NAG6 615 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 FBXW7Q969H0 707 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 TRIM47Q96LD4 638 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 ATP13A2Q9NQ11 1180 aa2.21□□□□□ -2.06
SNORD42B-201ENST00000458893 LORP23490 312 aaPredicted RBP2.2□□□□□ -2.06
SNORD42B-201ENST00000458893 FKBP8Q14318 412 aa2.2□□□□□ -2.06
SNORD42B-201ENST00000458893 SAMD7Q7Z3H4 446 aa2.2□□□□□ -2.06
SNORD42B-201ENST00000458893 TTC24A2A3L6 582 aaPredicted RBP2.19□□□□□ -2.06
SNORD42B-201ENST00000458893 ZPR1O75312 459 aa2.19□□□□□ -2.06
SNORD42B-201ENST00000458893 MAP3K9P80192 1104 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms