RNA–Protein interactions for RNA: ENSMUST00000049908.10

Ssbp4-201, Transcript of Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ssbp4, Length 1,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4-201ENSMUST00000049908 Adgrb2Q8CGM1 1561 aa31.79■■■□□ 2.68
Ssbp4-201ENSMUST00000049908 Topbp1Q6ZQF0 1515 aa31.78■■■□□ 2.68
Ssbp4-201ENSMUST00000049908 Kdm3bQ6ZPY7 1562 aa31.78■■■□□ 2.68
Ssbp4-201ENSMUST00000049908 UbtfP25976 765 aaKnown RBP31.73■■■□□ 2.67
Ssbp4-201ENSMUST00000049908 CltcQ68FD5 1675 aaKnown RBP31.72■■■□□ 2.67
Ssbp4-201ENSMUST00000049908 Ssh2Q5SW75 1423 aa31.71■■■□□ 2.67
Ssbp4-201ENSMUST00000049908 Naip5Q9R016 1403 aa31.7■■■□□ 2.67
Ssbp4-201ENSMUST00000049908 RictorQ6QI06 1708 aa31.69■■■□□ 2.66
Ssbp4-201ENSMUST00000049908 4930407I10RikD3Z5T8 1512 aa31.68■■■□□ 2.66
Ssbp4-201ENSMUST00000049908 Dip2bQ3UH60 1574 aa31.68■■■□□ 2.66
Ssbp4-201ENSMUST00000049908 Usp54Q8BL06 1588 aaKnown RBP31.68■■■□□ 2.66
Ssbp4-201ENSMUST00000049908 UacaQ8CGB3 1411 aa31.66■■■□□ 2.66
Ssbp4-201ENSMUST00000049908 Knl1Q66JQ7 1612 aa31.65■■■□□ 2.66
Ssbp4-201ENSMUST00000049908 Fam50aQ9WV03 339 aaKnown RBP31.63■■■□□ 2.65
Ssbp4-201ENSMUST00000049908 NclP09405 707 aaKnown RBP31.62■■■□□ 2.65
Ssbp4-201ENSMUST00000049908 Vps8Q0P5W1 1427 aa31.62■■■□□ 2.65
Ssbp4-201ENSMUST00000049908 Zbtb7cQ8VCZ7 619 aa31.61■■■□□ 2.65
Ssbp4-201ENSMUST00000049908 Rfx7F8VPJ6 1459 aa31.58■■■□□ 2.65
Ssbp4-201ENSMUST00000049908 ShprhQ7TPQ3 1674 aa31.57■■■□□ 2.64
Ssbp4-201ENSMUST00000049908 Bcl9Q9D219 1425 aa31.56■■■□□ 2.64
Ssbp4-201ENSMUST00000049908 Arhgap23Q69ZH9 1483 aa31.56■■■□□ 2.64
Ssbp4-201ENSMUST00000049908 Myo5cE9Q1F5 1742 aa31.54■■■□□ 2.64
Ssbp4-201ENSMUST00000049908 Med14A2ABV5 1459 aaKnown RBP31.54■■■□□ 2.64
Ssbp4-201ENSMUST00000049908 Kif1bQ60575 1816 aaKnown RBP31.53■■■□□ 2.64
Ssbp4-201ENSMUST00000049908 Topaz1E5FYH1 1653 aa31.52■■■□□ 2.64
Ssbp4-201ENSMUST00000049908 Pde4cQ3UEI1 686 aa31.5■■■□□ 2.63
Ssbp4-201ENSMUST00000049908 Hnrnpul2Q00PI9 745 aaKnown RBP31.49■■■□□ 2.63
Ssbp4-201ENSMUST00000049908 Gm13697A2AK42 830 aa31.47■■■□□ 2.63
Ssbp4-201ENSMUST00000049908 Prex1Q69ZK0 1650 aa31.46■■■□□ 2.63
Ssbp4-201ENSMUST00000049908 Adamts7Q68SA9 1657 aa31.43■■■□□ 2.62
Ssbp4-201ENSMUST00000049908 Hfm1D3Z4R1 1434 aa31.43■■■□□ 2.62
Ssbp4-201ENSMUST00000049908 Clstn2Q9ER65 966 aa31.42■■■□□ 2.62
Ssbp4-201ENSMUST00000049908 Dip2aQ8BWT5 1523 aa31.41■■■□□ 2.62
Ssbp4-201ENSMUST00000049908 Abcc6Q9R1S7 1498 aa31.39■■■□□ 2.62
Ssbp4-201ENSMUST00000049908 AlkP97793 1621 aa31.38■■■□□ 2.61
Ssbp4-201ENSMUST00000049908 Mia2Q91ZV0 1396 aa31.38■■■□□ 2.61
Ssbp4-201ENSMUST00000049908 Nup155Q99P88 1391 aaKnown RBP31.36■■■□□ 2.61
Ssbp4-201ENSMUST00000049908 Scn4aQ9ER60 1841 aa31.36■■■□□ 2.61
Ssbp4-201ENSMUST00000049908 Map4P27546 1125 aaKnown RBP31.35■■■□□ 2.61
Ssbp4-201ENSMUST00000049908 GphnQ8BUV3 769 aaKnown RBP31.33■■■□□ 2.61
Ssbp4-201ENSMUST00000049908 Zfp644E9QA22 1323 aa31.32■■■□□ 2.6
Ssbp4-201ENSMUST00000049908 Robo2Q7TPD3 1470 aa31.31■■■□□ 2.6
Ssbp4-201ENSMUST00000049908 Ttc21bQ0HA38 1315 aa31.26■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 Ylpm1Q9R0I7 1386 aaKnown RBP31.25■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 Fhad1A6PWD2 1420 aa31.25■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 Tmem131lQ3U3D7 1597 aa31.24■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 Akap12Q9WTQ5 1684 aa31.23■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 Asxl1P59598 1514 aa31.22■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 AnkarA2RT91 1465 aa31.21■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 Ube2uB1AUC4 352 aa31.21■■■□□ 2.59
Ssbp4-201ENSMUST00000049908 Myom3A2ABU4 1439 aa31.19■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Nsd2Q8BVE8 1365 aa31.18■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Rimbp3Q3V0F0 1606 aa31.18■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Adgrb3Q80ZF8 1522 aa31.18■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Ncoa1P70365 1447 aa31.18■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Ttll5Q8CHB8 1328 aa31.17■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Pip4k2bQ80XI4 416 aa31.16■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Chd2E9PZM4 1827 aaKnown RBP31.16■■■□□ 2.58
Ssbp4-201ENSMUST00000049908 Ltbp4Q8K4G1 1666 aa31.12■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 Phlpp1Q8CHE4 1687 aa31.12■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 Cd109Q8R422 1442 aa31.11■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 Kdm5aQ3UXZ9 1690 aa31.11■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 Lamc1P02468 1607 aaKnown RBP31.09■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 PtprgQ05909 1442 aa31.08■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 Skint5A7XUY5 1461 aa31.08■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 Scaf11E9PZM7 1456 aaKnown RBP31.08■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 DroshaQ5HZJ0 1373 aaKnown RBP31.08■■■□□ 2.57
Ssbp4-201ENSMUST00000049908 Ino80Q6ZPV2 1559 aa31.06■■■□□ 2.56
Ssbp4-201ENSMUST00000049908 Trak1Q6PD31 939 aa31.04■■■□□ 2.56
Ssbp4-201ENSMUST00000049908 Rims2Q9EQZ7 1530 aa31.02■■■□□ 2.56
Ssbp4-201ENSMUST00000049908 Tecpr2Q3UH45 1423 aa31■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Kif13aQ9EQW7 1749 aa30.99■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Tarbp1E9Q368 1579 aa30.99■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Itsn1Q9Z0R4 1714 aa30.98■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Mier1Q5UAK0 511 aa30.97■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Efcab6Q6P1E8 1516 aa30.97■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Arid4bA2CG63 1314 aaKnown RBP30.97■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Iqgap3F8VQ29 1632 aa30.95■■■□□ 2.55
Ssbp4-201ENSMUST00000049908 Erich6D3Z6S9 713 aa30.94■■■□□ 2.54
Ssbp4-201ENSMUST00000049908 Prdm2A2A7B5 1709 aaKnown RBP30.94■■■□□ 2.54
Ssbp4-201ENSMUST00000049908 Naip7Q9JIB3 1402 aa30.91■■■□□ 2.54
Ssbp4-201ENSMUST00000049908 Atp7aQ64430 1491 aa30.91■■■□□ 2.54
Ssbp4-201ENSMUST00000049908 Uggt1Q6P5E4 1551 aa30.91■■■□□ 2.54
Ssbp4-201ENSMUST00000049908 Mphosph9A6H5Y1 991 aa30.9■■■□□ 2.54
Ssbp4-201ENSMUST00000049908 Rapgef3Q8VCC8 918 aa30.9■■■□□ 2.54
Ssbp4-201ENSMUST00000049908 Txndc2Q6P902 515 aa30.89■■■□□ 2.53
Ssbp4-201ENSMUST00000049908 Fbxo41Q6NS60 873 aa30.85■■■□□ 2.53
Ssbp4-201ENSMUST00000049908 Stk24Q99KH8 431 aa30.85■■■□□ 2.53
Ssbp4-201ENSMUST00000049908 Edc4Q3UJB9 1406 aaKnown RBP30.83■■■□□ 2.53
Ssbp4-201ENSMUST00000049908 Gemin5Q8BX17 1502 aaKnown RBP30.82■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 Iqgap1Q9JKF1 1657 aaKnown RBP30.81■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 Ccer2J3QPU5 274 aa30.8■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 Gli3Q61602 1583 aa30.8■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 Nrxn3Q6P9K9 1571 aa30.8■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 Kif21bQ9QXL1 1668 aa30.79■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 ErbinQ80TH2 1402 aa30.79■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 PzpQ61838 1495 aa30.77■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 Lmtk3Q5XJV6 1424 aa30.77■■■□□ 2.52
Ssbp4-201ENSMUST00000049908 Abca8aQ8K442 1620 aa30.76■■■□□ 2.51
Ssbp4-201ENSMUST00000049908 Prrc2bQ7TPM1 1486 aaKnown RBP30.75■■■□□ 2.51
Retrieved 100 of 22,080 RNA–protein pairs in 9.2 ms