RNA–Protein interactions for RNA: ENST00000641272.1

PHGDH-213, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-213ENST00000641272 ERVFC1P60507 584 aa18.84■□□□□ 0.61
PHGDH-213ENST00000641272 TBC1D8BQ0IIM8 1120 aa18.84■□□□□ 0.61
PHGDH-213ENST00000641272 MIER3Q7Z3K6 550 aa18.84■□□□□ 0.61
PHGDH-213ENST00000641272 VN1R2Q8NFZ6 395 aa18.84■□□□□ 0.61
PHGDH-213ENST00000641272 NLRP7Q8WX94 980 aa18.84■□□□□ 0.61
PHGDH-213ENST00000641272 POP1Q99575 1024 aaKnown RBP18.84■□□□□ 0.61
PHGDH-213ENST00000641272 TLE6Q9H808 572 aa18.84■□□□□ 0.61
PHGDH-213ENST00000641272 PCDHA4Q9UN74 947 aa18.84■□□□□ 0.61
PHGDH-213ENST00000641272 LAG3P18627 525 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 EVCP57679 992 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 SMRP1Q8NCR6 262 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 CASD1Q96PB1 797 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 RIT2Q99578 217 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 TMEM117Q9H0C3 514 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 ZSWIM6Q9HCJ5 1215 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 SH3GLB2Q9NR46 395 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 NRBP2Q9NSY0 501 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 USP15Q9Y4E8 981 aaPredicted RBP18.83■□□□□ 0.6
PHGDH-213ENST00000641272 CYP46A1Q9Y6A2 500 aa18.83■□□□□ 0.6
PHGDH-213ENST00000641272 PSMD10O75832 226 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 DARSP14868 501 aaKnown RBP18.82■□□□□ 0.6
PHGDH-213ENST00000641272 SFNP31947 248 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 NPY5RQ15761 445 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 LLGL2Q6P1M3 1020 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 LRRC55Q6ZSA7 311 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 ECHDC2Q86YB7 292 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 RNF135Q8IUD6 432 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 ABI1Q8IZP0 508 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 BLIDQ8IZY5 108 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 LRRC43Q8N309 656 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 APOL5Q9BWW9 433 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 ELAC1Q9H777 363 aaKnown RBP18.82■□□□□ 0.6
PHGDH-213ENST00000641272 ENTPD7Q9NQZ7 604 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 RNF216Q9NWF9 866 aaPredicted RBP18.82■□□□□ 0.6
PHGDH-213ENST00000641272 KCNJ14Q9UNX9 436 aa18.82■□□□□ 0.6
PHGDH-213ENST00000641272 SLC37A4O43826 429 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 DEXIO95424 95 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 ZSCAN20P17040 1043 aaPredicted RBP18.81■□□□□ 0.6
PHGDH-213ENST00000641272 EIF4BP23588 611 aaKnown RBP18.81■□□□□ 0.6
PHGDH-213ENST00000641272 USP11P51784 963 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 UBE3AQ05086 875 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 DUSP6Q16828 381 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 INF2Q27J81 1249 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 CLLU1OSQ5K130 101 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 PLA2G4FQ68DD2 849 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 HELQQ8TDG4 1101 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 ARID2Q68CP9 1835 aa18.81■□□□□ 0.6
PHGDH-213ENST00000641272 FSCN2O14926 492 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 EYA4O95677 639 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 ATF7P17544 494 aaPredicted RBP18.8■□□□□ 0.6
PHGDH-213ENST00000641272 FAM189BP81408 668 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 COASYQ13057 564 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 NONOQ15233 471 aaKnown RBP eCLIP18.8■□□□□ 0.6
PHGDH-213ENST00000641272 LONRF3Q496Y0 759 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 Q4G0T1 1027 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 KCNT2Q6UVM3 1135 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 ETNPPLQ8TBG4 499 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 MRPS27Q92552 414 aaKnown RBP18.8■□□□□ 0.6
PHGDH-213ENST00000641272 ZNF558Q96NG5 402 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 TCF25Q9BQ70 676 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 MUC6Q6W4X9 2439 aa18.8■□□□□ 0.6
PHGDH-213ENST00000641272 HIDE1A8MVS5 230 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 M0R2N6 131 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 HOXA2O43364 376 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 SP100P23497 879 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-213ENST00000641272 CA8P35219 290 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 TARBP2Q15633 366 aaKnown RBP18.79■□□□□ 0.6
PHGDH-213ENST00000641272 LETM2Q2VYF4 491 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 HFE2Q6ZVN8 426 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 DAGLBQ8NCG7 672 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 C22orf23Q9BZE7 217 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 BMP2KQ9NSY1 1161 aaPredicted RBP18.79■□□□□ 0.6
PHGDH-213ENST00000641272 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 PDRG1Q9NUG6 133 aa18.79■□□□□ 0.6
PHGDH-213ENST00000641272 DDX25Q9UHL0 483 aaKnown RBP18.79■□□□□ 0.6
PHGDH-213ENST00000641272 TECTAO75443 2155 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 A0A087WZ62 844 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 STBD1O95210 358 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 HOXD11P31277 338 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-213ENST00000641272 XKR3Q5GH77 459 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 CPLX2Q6PUV4 134 aaKnown RBP18.78■□□□□ 0.6
PHGDH-213ENST00000641272 B3GNT9Q6UX72 402 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 RDM1Q8NG50 284 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 LPPQ93052 612 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 ZNF274Q96GC6 653 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-213ENST00000641272 RPGRIP1Q96KN7 1286 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 NLRP4Q96MN2 994 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 FDXACB1Q9BRP7 624 aaPredicted RBP18.78■□□□□ 0.6
PHGDH-213ENST00000641272 CDH22Q9UJ99 828 aa18.78■□□□□ 0.6
PHGDH-213ENST00000641272 PIN4Q9Y237 131 aaKnown RBP18.78■□□□□ 0.6
PHGDH-213ENST00000641272 DDX11L8A8MPP1 907 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 NT5C1B-RDH14C9J2C7 533 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 EML1O00423 815 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 TECP42680 631 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 SCRN1Q12765 414 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 HERC4Q5GLZ8 1057 aaPredicted RBP18.77■□□□□ 0.6
PHGDH-213ENST00000641272 KRT25Q7Z3Z0 450 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 ZNF598Q86UK7 904 aaKnown RBP18.77■□□□□ 0.6
PHGDH-213ENST00000641272 RHPN2Q8IUC4 686 aa18.77■□□□□ 0.6
PHGDH-213ENST00000641272 KSR1Q8IVT5 923 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms