RNA–Protein interactions for RNA: ENST00000639406.1

KCNMA1-259, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 5,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-259ENST00000639406 BPIFB4P59827 614 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 IFRD2Q12894 506 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 PLEKHM3Q6ZWE6 761 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 CERKQ8TCT0 537 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 NYXQ9GZU5 481 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 RANBP17Q9H2T7 1088 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 UNC45AQ9H3U1 944 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 TRIM49P0CI25 452 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 TRIM49CP0CI26 452 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 PLCG2P16885 1265 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 ATP4AP20648 1035 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 FGFR4P22455 802 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 RESTQ13127 1097 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 ITIH4Q14624 930 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 INPP5DQ92835 1189 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 BBS2Q9BXC9 721 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 SLITRK6Q9H5Y7 841 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 NOL6Q9H6R4 1146 aaKnown RBP11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 TRIM39Q9HCM9 518 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 DTNAQ9Y4J8 743 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 SMCO2A6NFE2 343 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 CLPTM1O96005 669 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 NR2F2P24468 414 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 CCZ1BP86790 482 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 CCZ1P86791 482 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 DMC1Q14565 340 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 MAPRE2Q15555 327 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 KRT39Q6A163 491 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 RPAP3Q9H6T3 665 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 EFCAB5A4FU69 1503 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 PTPN23Q9H3S7 1636 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 A0A0D9SFI3 127 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 K7ENM7 598 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 GYS1P13807 737 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 PLOD1Q02809 727 aaPredicted RBP11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 KRT17Q04695 432 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 TJAP1Q5JTD0 557 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 KDM7AQ6ZMT4 941 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 ZNF654Q8IZM8 581 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 MCRS1Q96EZ8 462 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 ZIM3Q96PE6 472 aa11.61□□□□□ -0.55
KCNMA1-259ENST00000639406 B2RBV5 119 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 F8W031 263 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 KRT6AP02538 564 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 KRT6BP04259 564 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 HSPD1P10809 573 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 FBLN1P23142 703 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 KRT6CP48668 564 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 E4F1Q66K89 784 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 ALKBH5Q6P6C2 394 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 C16orf89Q6UX73 402 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 KCTD6Q8NC69 237 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 NSL1Q96IY1 281 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 NDST4Q9H3R1 872 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 SAP30BPQ9UHR5 308 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 INPP5FQ9Y2H2 1132 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 SPDYE16A6NNV3 312 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 P4HA2O15460 535 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 GFPT1Q06210 699 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 SPDYE2Q495Y8 402 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 TAF1BQ53T94 588 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 BTN2A1Q7KYR7 527 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 NSUN7Q8NE18 718 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 HNRNPLLQ8WVV9 542 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 PAGE5Q96GU1 130 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 KDM4CQ9H3R0 1056 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 TRPC7Q9HCX4 862 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 DDX18Q9NVP1 670 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 ADAMTS1Q9UHI8 967 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 FAM153AQ9UHL3 310 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 HERC5Q9UII4 1024 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 RWDD3Q9Y3V2 267 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 MAP3K19Q56UN5 1328 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 AP3B1O00203 1094 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 ORC4O43929 436 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 LRRN2O75325 713 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 C4BPBP20851 252 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 RHOT2Q8IXI1 618 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 FAF2Q96CS3 445 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 NEUROG2Q9H2A3 272 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 MMADHCQ9H3L0 296 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 ALG13Q9NP73 1137 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 C15orf41Q9Y2V0 281 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 IPPQ9Y573 584 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 GMEB1Q9Y692 573 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 BLMP54132 1417 aaPredicted RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 PCP4L1A6NKN8 68 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 TARSP26639 723 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 CHRNA3P32297 505 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 PSMC2P35998 433 aaKnown RBP11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 NCAPHQ15003 741 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 KYNUQ16719 465 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 CAPSLQ8WWF8 208 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 XAGE2Q96GT9 111 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 TRAPPC9Q96Q05 1148 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 GORASP1Q9BQQ3 440 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 TSSK1BQ9BXA7 367 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 EURLQ9NYK6 297 aa11.6□□□□□ -0.55
KCNMA1-259ENST00000639406 GCNT4Q9P109 453 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms