RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 MSH4O15457 936 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 ZNF862O60290 1169 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 GAS7O60861 476 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 OATP04181 439 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 SRGAP2BP0DMP2 458 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 LLGL2Q6P1M3 1020 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 KCNT2Q6UVM3 1135 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 TRIM67Q6ZTA4 783 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 KCNB2Q92953 911 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 PBXIP1Q96AQ6 731 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 ZNF558Q96NG5 402 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 TCF25Q9BQ70 676 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 APOL5Q9BWW9 433 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 RNF19AQ9NV58 838 aa21.42■■□□□ 1.02
SMN2-215ENST00000628696 PBX3P40426 434 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 TECP42680 631 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 MRE11P49959 708 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 CCT2P78371 535 aaKnown RBP21.41■■□□□ 1.02
SMN2-215ENST00000628696 ZXDAP98168 799 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 PLCB3Q01970 1234 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 PRKCEQ02156 737 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 KRT17Q04695 432 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 NTRK3Q16288 839 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 ECHDC2Q86YB7 292 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 LINC01465Q8N7H1 131 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 TEKT3Q9BXF9 490 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 RNF26Q9BY78 433 aaPredicted RBP21.41■■□□□ 1.02
SMN2-215ENST00000628696 LZTS1Q9Y250 596 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 TRIOO75962 3097 aa21.41■■□□□ 1.02
SMN2-215ENST00000628696 NID2Q14112 1375 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 FGFR4P22455 802 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 RPS6KB1P23443 525 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 HSPA4P34932 840 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 NLRP5P59047 1200 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 TBC1D8BQ0IIM8 1120 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 CBX2Q14781 532 aaPredicted RBP21.4■■□□□ 1.02
SMN2-215ENST00000628696 UGCGQ16739 394 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 LRCH2Q5VUJ6 765 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 TMC7Q7Z402 723 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 ZNF710Q8N1W2 664 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 LRRC43Q8N309 656 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 NLRP7Q8WX94 980 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 SUSD6Q92537 303 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 GJA10Q969M2 543 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 UNC45AQ9H3U1 944 aa21.4■■□□□ 1.02
SMN2-215ENST00000628696 NCOA5Q9HCD5 579 aaKnown RBP21.4■■□□□ 1.02
SMN2-215ENST00000628696 HIDE1A8MVS5 230 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 EDIL3O43854 480 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 DARSP14868 501 aaKnown RBP21.39■■□□□ 1.01
SMN2-215ENST00000628696 ATF7P17544 494 aaPredicted RBP21.39■■□□□ 1.01
SMN2-215ENST00000628696 SFNP31947 248 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 PPM1AP35813 382 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 GPC3P51654 580 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 USP11P51784 963 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 JAK3P52333 1124 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 ANKRD54Q6NXT1 300 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 SLC5A5Q92911 643 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 RIT2Q99578 217 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 NGRNQ9NPE2 291 aaKnown RBP21.39■■□□□ 1.01
SMN2-215ENST00000628696 SPG21Q9NZD8 308 aa21.39■■□□□ 1.01
SMN2-215ENST00000628696 CSDE1O75534 798 aaKnown RBP21.38■■□□□ 1.01
SMN2-215ENST00000628696 IFNAR1P17181 557 aa21.38■■□□□ 1.01
SMN2-215ENST00000628696 PSMA5P28066 241 aa21.38■■□□□ 1.01
SMN2-215ENST00000628696 CLLU1OSQ5K130 101 aa21.38■■□□□ 1.01
SMN2-215ENST00000628696 TMEM184AQ6ZMB5 413 aa21.38■■□□□ 1.01
SMN2-215ENST00000628696 MIER3Q7Z3K6 550 aa21.38■■□□□ 1.01
SMN2-215ENST00000628696 BMP8AQ7Z5Y6 402 aa21.38■■□□□ 1.01
SMN2-215ENST00000628696 HELQQ8TDG4 1101 aa21.38■■□□□ 1.01
SMN2-215ENST00000628696 SEPT9Q9UHD8 586 aaPredicted RBP21.38■■□□□ 1.01
SMN2-215ENST00000628696 SP100P23497 879 aaPredicted RBP21.37■■□□□ 1.01
SMN2-215ENST00000628696 PDIA3P30101 505 aaKnown RBP21.37■■□□□ 1.01
SMN2-215ENST00000628696 CA8P35219 290 aa21.37■■□□□ 1.01
SMN2-215ENST00000628696 MTERF2Q49AM1 385 aa21.37■■□□□ 1.01
SMN2-215ENST00000628696 SUGP1Q8IWZ8 645 aaKnown RBP21.37■■□□□ 1.01
SMN2-215ENST00000628696 FBXL16Q8N461 479 aa21.37■■□□□ 1.01
SMN2-215ENST00000628696 TBCKQ8TEA7 893 aa21.37■■□□□ 1.01
SMN2-215ENST00000628696 AGXT2Q9BYV1 514 aa21.37■■□□□ 1.01
SMN2-215ENST00000628696 S1PR5Q9H228 398 aa21.37■■□□□ 1.01
SMN2-215ENST00000628696 SH3GLB2Q9NR46 395 aa21.37■■□□□ 1.01
SMN2-215ENST00000628696 A0A0U1RQF3 1178 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 EOMESO95936 686 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 DRP2Q13474 957 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 KCNC3Q14003 757 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 SYCE2Q6PIF2 218 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 TRIM22Q8IYM9 498 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 SH2D3AQ9BRG2 576 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 GCOM2Q9BZD3 368 aaPredicted RBP21.36■■□□□ 1.01
SMN2-215ENST00000628696 DACT1Q9NYF0 836 aa21.36■■□□□ 1.01
SMN2-215ENST00000628696 WDFY4Q6ZS81 3184 aa21.35■■□□□ 1.01
SMN2-215ENST00000628696 TMEM150BA6NC51 233 aa21.35■■□□□ 1.01
SMN2-215ENST00000628696 NT5C1B-RDH14C9J2C7 533 aa21.35■■□□□ 1.01
SMN2-215ENST00000628696 SSRP1Q08945 709 aaKnown RBP21.35■■□□□ 1.01
SMN2-215ENST00000628696 SMC1AQ14683 1233 aaKnown RBP21.35■■□□□ 1.01
SMN2-215ENST00000628696 TARBP2Q15633 366 aaKnown RBP21.35■■□□□ 1.01
SMN2-215ENST00000628696 IER5LQ5T953 404 aa21.35■■□□□ 1.01
SMN2-215ENST00000628696 ZBTB33Q86T24 672 aa21.35■■□□□ 1.01
SMN2-215ENST00000628696 ZNF598Q86UK7 904 aaKnown RBP21.35■■□□□ 1.01
SMN2-215ENST00000628696 PCDHA4Q9UN74 947 aa21.35■■□□□ 1.01
SMN2-215ENST00000628696 MYO10Q9HD67 2058 aa21.35■■□□□ 1.01
SMN2-215ENST00000628696 DDX11L8A8MPP1 907 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms