RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 ACAP1Q15027 740 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 ZXDCQ2QGD7 858 aaPredicted RBP6.32□□□□□ -1.4
HDDC2-207ENST00000608532 TAF7LQ5H9L4 462 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 GIMAP6Q6P9H5 292 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 KLHDC10Q6PID8 442 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 ZZZ3Q8IYH5 903 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 FUKQ8N0W3 1084 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 BCL6BQ8N143 479 aaPredicted RBP6.32□□□□□ -1.4
HDDC2-207ENST00000608532 DYDC2Q96IM9 177 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 PLA2G12BQ9BX93 195 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 KRTAP9-3Q9BYQ3 159 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 ZMAT4Q9H898 229 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 KCMF1Q9P0J7 381 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 DNAI1Q9UI46 699 aa6.32□□□□□ -1.4
HDDC2-207ENST00000608532 RBM8AQ9Y5S9 174 aaKnown RBP6.32□□□□□ -1.4
HDDC2-207ENST00000608532 PDE8AO60658 829 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 H2AFYO75367 372 aaKnown RBP6.31□□□□□ -1.4
HDDC2-207ENST00000608532 MAFO75444 373 aaPredicted RBP6.31□□□□□ -1.4
HDDC2-207ENST00000608532 CD40P25942 277 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 STAT3P40763 770 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 SELENOPP49908 381 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 BCAR1P56945 870 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 ATP2C1P98194 919 aaPredicted RBP6.31□□□□□ -1.4
HDDC2-207ENST00000608532 SMC1BQ8NDV3 1235 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 CFHR4Q92496 578 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 GCDHQ92947 438 aaPredicted RBP6.31□□□□□ -1.4
HDDC2-207ENST00000608532 TMEM176AQ96HP8 235 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 WWC2-AS2Q96NR7 200 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 SPTLC3Q9NUV7 552 aa6.31□□□□□ -1.4
HDDC2-207ENST00000608532 GOLGA8BA8MQT2 603 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 GSG1L2A8MUP6 293 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 MUSKO15146 869 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 TGM5O43548 720 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 SESN2P58004 480 aaPredicted RBP6.3□□□□□ -1.4
HDDC2-207ENST00000608532 OCRLQ01968 901 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 PLEKHG4Q58EX7 1191 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 UNQ6494/PRO21346Q6UXR6 183 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 C11orf74Q86VG3 221 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 SHCBP1Q8NEM2 672 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 SH3RF3Q8TEJ3 882 aaPredicted RBP6.3□□□□□ -1.4
HDDC2-207ENST00000608532 GFM2Q969S9 779 aaKnown RBP6.3□□□□□ -1.4
HDDC2-207ENST00000608532 ADOQ96SZ5 270 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 CDK5RAP1Q96SZ6 601 aaKnown RBP6.3□□□□□ -1.4
HDDC2-207ENST00000608532 C1QTNF3Q9BXJ4 246 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 SLKQ9H2G2 1235 aaPredicted RBP6.3□□□□□ -1.4
HDDC2-207ENST00000608532 MS4A5Q9H3V2 200 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 MTG2Q9H4K7 406 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 POLR3BQ9NW08 1133 aaPredicted RBP6.3□□□□□ -1.4
HDDC2-207ENST00000608532 MSRAQ9UJ68 235 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 SYNPO2Q9UMS6 1093 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 VWA7Q9Y334 891 aa6.3□□□□□ -1.4
HDDC2-207ENST00000608532 A0A087X0B3 334 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 LCHNA4D1U4 455 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 SLC26A4O43511 780 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 RAD17O75943 681 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 FKBP9O95302 570 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 COMTP21964 271 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 ADCYAP1R1P41586 468 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 SMAD3P84022 425 aaKnown RBP6.29□□□□□ -1.4
HDDC2-207ENST00000608532 HGFACQ04756 655 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 KIAA1841Q6NSI8 718 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 FKBP9P1Q75LS8 142 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 UBR7Q8N806 425 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 FERMT2Q96AC1 680 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 RPL10LQ96L21 214 aaKnown RBP6.29□□□□□ -1.4
HDDC2-207ENST00000608532 WDR92Q96MX6 357 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 SEMA4AQ9H3S1 761 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 TSC22D4Q9Y3Q8 395 aa6.29□□□□□ -1.4
HDDC2-207ENST00000608532 CTDP1Q9Y5B0 961 aaPredicted RBP6.29□□□□□ -1.4
HDDC2-207ENST00000608532 C2orf78A6NCI8 922 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 MAFGO15525 162 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 PCDH8O95206 1070 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 ACO1P21399 889 aaKnown RBP6.28□□□□□ -1.4
HDDC2-207ENST00000608532 MSX2P35548 267 aaPredicted RBP6.28□□□□□ -1.4
HDDC2-207ENST00000608532 RPS19P39019 145 aaKnown RBP6.28□□□□□ -1.4
HDDC2-207ENST00000608532 LSSP48449 732 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 BPIFB4P59827 614 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 CDSNQ15517 529 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 SDE2Q6IQ49 451 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 ESPNLQ6ZVH7 1005 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 POLNQ7Z5Q5 900 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 BMP8AQ7Z5Y6 402 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 SPRED1Q7Z699 444 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 GPR135Q8IZ08 494 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 USP7Q93009 1102 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 NOL10Q9BSC4 688 aaKnown RBP6.28□□□□□ -1.4
HDDC2-207ENST00000608532 MYRFQ9Y2G1 1151 aa6.28□□□□□ -1.4
HDDC2-207ENST00000608532 ST20-MTHFSA0A0A6YYL1 179 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 A0A1W2PRX2 142 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 ELL2O00472 640 aaPredicted RBP6.27□□□□□ -1.41
HDDC2-207ENST00000608532 RAB11FIP3O75154 756 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 HNRNPLP14866 589 aaKnown RBP eCLIP6.27□□□□□ -1.41
HDDC2-207ENST00000608532 LSP1P33241 339 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 TCIRG1Q13488 830 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 RIN1Q13671 783 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 LRRC32Q14392 662 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 GRM7Q14831 915 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 SPDYAQ5MJ70 313 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 LCE5AQ5TCM9 118 aa6.27□□□□□ -1.41
HDDC2-207ENST00000608532 KRT40Q6A162 431 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms