RNA–Protein interactions for RNA: ENST00000604624.6

KCNMA1-223, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 1 (best)

Gene KCNMA1, Length 11,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-223	ENST00000604624	CASS4	Q9NQ75	786 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MBIP	Q9NS73	344 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RRP15	Q9Y3B9	282 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SLC4A4	Q9Y6R1	1079 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ARHGEF35	A5YM69	484 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GOLGA8K	D6RF30	607 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CLASP2	O75122	1294 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PARP1	P09874	1014 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GSTO1	P78417	241 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RNASEL	Q05823	741 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GABPB1	Q06547	395 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SGSM1	Q2NKQ1	1148 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	USP39	Q53GS9	565 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ALS2CL	Q60I27	953 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	E4F1	Q66K89	784 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KRT39	Q6A163	491 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RFX6	Q8HWS3	928 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	OSCP1	Q8WVF1	389 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GAL3ST3	Q96A11	431 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	BTBD6	Q96KE9	485 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	FSD1L	Q9BXM9	530 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	HPS5	Q9UPZ3	1129 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SPEF1	Q9Y4P9	236 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GUCA1A	P43080	201 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ST5	P78524	1137 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PRKCQ	Q04759	706 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MMRN1	Q13201	1228 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SPDYE7P	Q495Y7	208 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KLHL17	Q6TDP4	642 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	COMMD2	Q86X83	199 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CLEC4F	Q8N1N0	589 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZNF555	Q8NEP9	628 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZBTB18	Q99592	522 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PDE11A	Q9HCR9	933 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SAMSN1	Q9NSI8	373 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MCM9	Q9NXL9	1143 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MYH7	P12883	1935 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NCOR1	O75376	2440 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	AHDC1	Q5TGY3	1603 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CIC	Q96RK0	1608 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	N4BP1	O75113	896 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCDC130	P13994	396 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GUCY2D	Q02846	1103 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	HIBCH	Q6NVY1	386 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RRAGA	Q7L523	313 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NUP93	Q8N1F7	819 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	COG1	Q8WTW3	980 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GTSE1	Q9NYZ3	720 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PPIE	Q9UNP9	301 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SNTN	A6NMZ2	147 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	TK2	O00142	265 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	AFP	P02771	609 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NCALD	P61601	193 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	POU5F1	Q01860	360 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SEPT2	Q15019	361 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	HAUS3	Q68CZ6	603 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KIAA1841	Q6NSI8	718 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624		Q6ZUG5	572 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	BBS5	Q8N3I7	341 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	APPL2	Q8NEU8	664 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CNBD2	Q96M20	576 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZNF212	Q9UDV6	495 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KIF1A	Q12756	1690 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PMS2	P54278	862 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RARS2	Q5T160	578 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SPATA1	Q5VX52	437 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MICALL2	Q8IY33	904 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ZNF579	Q8NAF0	562 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	XPO4	Q9C0E2	1151 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	KRT84	Q9NSB2	600 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MOCS3	O95396	460 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CHGB	P05060	677 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	IL6	P05231	212 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PSMC3	P17980	439 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	EFR3A	Q14156	821 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LPIN1	Q14693	890 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SFMBT2	Q5VUG0	894 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RIN3	Q8TB24	985 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SNRNP27	Q8WVK2	155 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	LTBP4	Q8N2S1	1624 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	MYC	P01106	439 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SOX6	P35712	828 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PDE6C	P51160	858 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SFSWAP	Q12872	951 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	OCLN	Q16625	522 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NFIL3	Q16649	462 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	THOC7	Q6I9Y2	204 aa	Known RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CCDC81	Q6ZN84	652 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	GLG1	Q92896	1179 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SLF1	Q9BQI6	1058 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	ERAP1	Q9NZ08	941 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	COL15A1	P39059	1388 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	PASK	Q96RG2	1323 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	EXOC1L	A0A1B0GW35	172 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624		M0R3G1	203 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	RTN3	O95197	1032 aa	Predicted RBP	4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	NCAM1	P13591	858 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	SLC10A5	Q5PT55	438 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CRLF3	Q8IUI8	442 aa		4.35	□□□□□ -1.71
KCNMA1-223	ENST00000604624	CPXCR1	Q8N123	301 aa		4.35	□□□□□ -1.71

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