RNA–Protein interactions for RNA: ENST00000584550.1

GGA3-219, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-219ENST00000584550 SLC39A11Q8N1S5 342 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 LRRC43Q8N309 656 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 IGDCC4Q8TDY8 1250 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 RSAD2Q8WXG1 361 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 ACSF2Q96CM8 615 aaPredicted RBP11.61□□□□□ -0.55
GGA3-219ENST00000584550 RRP36Q96EU6 259 aaKnown RBP11.61□□□□□ -0.55
GGA3-219ENST00000584550 TCEANC2Q96MN5 208 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 MYL10Q9BUA6 226 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 ELAC1Q9H777 363 aaKnown RBP11.61□□□□□ -0.55
GGA3-219ENST00000584550 PSTPIP2Q9H939 334 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 DUSP12Q9UNI6 340 aa11.61□□□□□ -0.55
GGA3-219ENST00000584550 EPG5Q9HCE0 2579 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 hCG_1642624A0A1W2PR95 340 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 DDX39AO00148 427 aaKnown RBP11.6□□□□□ -0.55
GGA3-219ENST00000584550 BACH1O14867 736 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 CRYBB1P53674 252 aaPredicted RBP11.6□□□□□ -0.55
GGA3-219ENST00000584550 DSC3Q14574 896 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 CLLU1OSQ5K130 101 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 CABP7Q86V35 215 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 VPS52Q8N1B4 723 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 METTL13Q8N6R0 699 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 HELQQ8TDG4 1101 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 ZNF668Q96K58 619 aaPredicted RBP11.6□□□□□ -0.55
GGA3-219ENST00000584550 SDF4Q9BRK5 362 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 SEMA4AQ9H3S1 761 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 KCNH7Q9NS40 1196 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 DZANK1Q9NVP4 752 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 SEC63Q9UGP8 760 aaKnown RBP11.6□□□□□ -0.55
GGA3-219ENST00000584550 CA14Q9ULX7 337 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 PCDHA6Q9UN73 950 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 PCDHA8Q9Y5H6 950 aa11.6□□□□□ -0.55
GGA3-219ENST00000584550 KRBA1A5PL33 1030 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 CCDC69A6NI79 296 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 SPDYE3A6NKU9 549 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 SH2B2O14492 632 aaPredicted RBP11.59□□□□□ -0.55
GGA3-219ENST00000584550 HOXA2O43364 376 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 DCNP07585 359 aaKnown RBP11.59□□□□□ -0.55
GGA3-219ENST00000584550 CPA1P15085 419 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 ZSCAN20P17040 1043 aaPredicted RBP11.59□□□□□ -0.55
GGA3-219ENST00000584550 HSPA4P34932 840 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 ALDH7A1P49419 539 aaKnown RBP11.59□□□□□ -0.55
GGA3-219ENST00000584550 BCAR1P56945 870 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 KRT32Q14532 448 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 BMS1Q14692 1282 aaKnown RBP11.59□□□□□ -0.55
GGA3-219ENST00000584550 CCDC149Q6ZUS6 474 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 OTOP3Q7RTS5 596 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 TMEM173Q86WV6 379 aaPredicted RBP11.59□□□□□ -0.55
GGA3-219ENST00000584550 ECHDC2Q86YB7 292 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 RAB11FIP4Q86YS3 637 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 SLC22A17Q8WUG5 538 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 RUBCNQ92622 972 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 JAKMIP1Q96N16 626 aaKnown RBP11.59□□□□□ -0.55
GGA3-219ENST00000584550 LY9Q9HBG7 655 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 DLL3Q9NYJ7 618 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 SNX14Q9Y5W7 946 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 DENND4AQ7Z401 1863 aa11.59□□□□□ -0.55
GGA3-219ENST00000584550 MAFGO15525 162 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 HBP1O60381 514 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 GPR32O75388 356 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 SP9P0CG40 484 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 MYBP10242 640 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 FGD1P98174 961 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 ITGB3BPQ13352 177 aaPredicted RBP11.58□□□□□ -0.56
GGA3-219ENST00000584550 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 LONRF3Q496Y0 759 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 DHX32Q7L7V1 743 aaKnown RBP11.58□□□□□ -0.56
GGA3-219ENST00000584550 GPR149Q86SP6 731 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 ZNF654Q8IZM8 581 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 ST13P5Q8NFI4 369 aaPredicted RBP11.58□□□□□ -0.56
GGA3-219ENST00000584550 TMEM169Q96HH4 297 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 PGBD1Q96JS3 809 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 TMEM87BQ96K49 555 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 MXRA8Q9BRK3 442 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 ZBP1Q9H171 429 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 NAP1L2Q9ULW6 460 aaPredicted RBP11.58□□□□□ -0.56
GGA3-219ENST00000584550 C2orf16Q68DN1 1984 aa11.58□□□□□ -0.56
GGA3-219ENST00000584550 ZBTB42B2RXF5 422 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 ZC3H11AO75152 810 aaKnown RBP eCLIP11.57□□□□□ -0.56
GGA3-219ENST00000584550 PLEKHA8P1O95397 391 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 CCNE2O96020 404 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 SSBP05455 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
GGA3-219ENST00000584550 RXRAP19793 462 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 FGFR4P22455 802 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 LETM2Q2VYF4 491 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 ZNF484Q5JVG2 852 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 SWSAP1Q6NVH7 229 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 PDXDC2PQ6P474 469 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 CKAP2LQ8IYA6 745 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 TMTC2Q8N394 836 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 CCDC82Q8N4S0 544 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 SRBD1Q8N5C6 995 aaKnown RBP11.57□□□□□ -0.56
GGA3-219ENST00000584550 CTCFLQ8NI51 663 aaPredicted RBP11.57□□□□□ -0.56
GGA3-219ENST00000584550 SPZ1Q9BXG8 430 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 SFXN1Q9H9B4 322 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 TBC1D17Q9HA65 648 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 AGO4Q9HCK5 861 aaKnown RBP11.57□□□□□ -0.56
GGA3-219ENST00000584550 ZNF302Q9NR11 478 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 WNT16Q9UBV4 365 aa11.57□□□□□ -0.56
GGA3-219ENST00000584550 SLC12A7Q9Y666 1083 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms