RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 ACLYP53396 1101 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 SMAD3P84022 425 aaKnown RBP5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 CNTN2Q02246 1040 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 PPARAQ07869 468 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 MAP7Q14244 749 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 UMODL1Q5DID0 1318 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 ZMYM1Q5SVZ6 1142 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 TMEM63BQ5T3F8 832 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 VPS53Q5VIR6 699 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 IL31Q6EBC2 164 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 TTC41PQ6P2S7 1318 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 C6orf15Q6UXA7 325 aaPredicted RBP5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 TOGARAM2Q6ZUX3 1019 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 ARMCX2Q7L311 632 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 ANKRD33Q7Z3H0 272 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 LRRTM3Q86VH5 581 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 FAM126BQ8IXS8 530 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 CCDC144CPQ8IYA2 1237 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 ANKRD42Q8N9B4 389 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 FAM133AQ8N9E0 248 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 GATAD2BQ8WXI9 593 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 KIFC2Q96AC6 838 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 CDX2Q99626 313 aaPredicted RBP5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 SMAD5Q99717 465 aaKnown RBP5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 ELAC2Q9BQ52 826 aaKnown RBP5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 ESYT1Q9BSJ8 1104 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 EPN3Q9H201 632 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 A1CFQ9NQ94 594 aaKnown RBP5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 INCENPQ9NQS7 918 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 TMPRSS4Q9NRS4 437 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 CLIP2Q9UDT6 1046 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 PUF60Q9UHX1 559 aaKnown RBP5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 WDFY4Q6ZS81 3184 aa5.61□□□□□ -1.51
GAPLINC-202ENST00000579007 LOXHD1Q8IVV2 1947 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 A0A0D9SFI3 127 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SOWAHBA6NEL2 793 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 EREGO14944 169 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 PRPF3O43395 683 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SLC26A4O43511 780 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 LILRA1O75019 489 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 DUSP11O75319 330 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 TTLL1O95922 423 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 ASGR1P07306 291 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 ZFYP08048 801 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 VDRP11473 427 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 BMP3P12645 472 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 GNAT2P19087 354 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 MX1P20591 662 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 NOVP48745 357 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SARSP49591 514 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 PPM1FP49593 454 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 NEK3P51956 506 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 OAZ1P54368 228 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 GJA9P57773 515 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SNAP25P60880 206 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SH3BP2P78314 561 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 NKX3-2P78367 333 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 BEX3Q00994 111 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 FPGSQ05932 587 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 ACVR2BQ13705 512 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 CBX2Q14781 532 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SETDB1Q15047 1291 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 DHCR24Q15392 516 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 KCNA10Q16322 511 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 MUM1L1Q5H9M0 696 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SLFN13Q68D06 897 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 MRM1Q6IN84 353 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 TTBK2Q6IQ55 1244 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 RINLQ6ZS11 566 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 KCTD1Q719H9 257 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 STRA8Q7Z7C7 330 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 ZNF589Q86UQ0 364 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SPATS2Q86XZ4 545 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 FBXO16Q8IX29 292 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 MSL3Q8N5Y2 521 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 CCDC89Q8N998 374 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 NEDD1Q8NHV4 660 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 MAFAQ8NHW3 353 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 ATXN2LQ8WWM7 1075 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 JPH3Q8WXH2 748 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 DDX1Q92499 740 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 KISS1RQ969F8 398 aaPredicted RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 VWCEQ96DN2 955 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 GMCL1Q96IK5 515 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 AGBL1Q96MI9 1066 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 YIPF4Q9BSR8 244 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 TSEN34Q9BSV6 310 aaKnown RBP5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 FSD1Q9BTV5 496 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SELENOOQ9BVL4 669 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 RHOBTB2Q9BYZ6 727 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SEMA6BQ9H3T3 888 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 FBRSQ9HAH7 460 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 MKNK2Q9HBH9 465 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 STARD7Q9NQZ5 370 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 IL17RBQ9NRM6 502 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 RAB6BQ9NRW1 208 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 RNF146Q9NTX7 359 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 TMEM63CQ9P1W3 806 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 SYNPO2Q9UMS6 1093 aa5.6□□□□□ -1.51
GAPLINC-202ENST00000579007 CNPY2Q9Y2B0 182 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms