RNA–Protein interactions for RNA: ENST00000578373.5

ERBB2-206, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best)

Gene ERBB2, Length 4,523 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-206ENST00000578373 SMC1BQ8NDV3 1235 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 KLHL11Q9NVR0 708 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 ADAM22Q9P0K1 906 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 SSX2IPQ9Y2D8 614 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 ITIH6Q6UXX5 1313 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 ZNF18P17022 549 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 PHBP35232 272 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 PMS2P54278 862 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 SLC8A3P57103 927 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 CCDC14Q49A88 953 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 NAALADL2Q58DX5 795 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 CYFIP1Q7L576 1253 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 NME8Q8N427 588 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 RAB3IL1Q8TBN0 382 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 HDAC7Q8WUI4 952 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 CCT8L2Q96SF2 557 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 DCTN4Q9UJW0 460 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 PABPN1LA6NDY0 278 aaKnown RBP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 F5H423 210 aaPredicted RBP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 PSMD14O00487 310 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 CYP26A1O43174 497 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 PDHBP11177 359 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 GPC5P78333 572 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 NXNQ6DKJ4 435 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 CCDC137Q6PK04 289 aaKnown RBP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 TMEM270Q6UE05 265 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 ZBTB8OSQ8IWT0 167 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 ATP6V0A1Q93050 837 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 C7orf25Q9BPX7 421 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 LXNQ9BS40 222 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 SPZ1Q9BXG8 430 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 PITPNM3Q9BZ71 974 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 INTS2Q9H0H0 1204 aaKnown RBP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 GINM1Q9NU53 330 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 RASA4BC9J798 803 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 IPO5O00410 1097 aaKnown RBP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 RASA4O43374 803 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 ZRANB2O95218 330 aaKnown RBP eCLIP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 TNNC2P02585 160 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 SLMAPQ14BN4 828 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 PDXDC2PQ6P474 469 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 HIPK4Q8NE63 616 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 HVCN1Q96D96 273 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 RIOK1Q9BRS2 568 aaKnown RBP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 NUP85Q9BW27 656 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 ALG13Q9NP73 1137 aaKnown RBP12.94□□□□□ -0.34
ERBB2-206ENST00000578373 SMYD2Q9NRG4 433 aa12.94□□□□□ -0.34
ERBB2-206ENST00000578373 A0A0G2JND7 137 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 K7ERI5 159 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 EVI5O60447 810 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 ABL1P00519 1130 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 EVX2Q03828 476 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 ZNF543Q08ER8 600 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 SEC23AQ15436 765 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 C6orf118Q5T5N4 469 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 TRIM59Q8IWR1 403 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 CDAN1Q8IWY9 1227 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 RHOT2Q8IXI1 618 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 MDM1Q8TC05 714 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 ZNF512BQ96KM6 892 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 ANKZF1Q9H8Y5 726 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 DBR1Q9UK59 544 aaKnown RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 PNMA2Q9UL42 364 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 BRAFP15056 766 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 TAL1P17542 331 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 PPM1FP49593 454 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 BPIFB4P59827 614 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 ARHGEF18Q6ZSZ5 1173 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 RMDN3Q96TC7 470 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 TPX2Q9ULW0 747 aaKnown RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 CLTCQ00610 1675 aaKnown RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 DENND3A2RUS2 1198 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 PI4K2BG5E9Z4 385 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 PDE1BQ01064 536 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 FOXR1Q6PIV2 292 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 C3orf67Q6ZVT6 689 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 PDCD7Q8N8D1 485 aaKnown RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 ZNF564Q8TBZ8 553 aaPredicted RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 CNKSR1Q969H4 720 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 INTS13Q9NVM9 706 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 PCSK1NQ9UHG2 260 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 IVNS1ABPQ9Y6Y0 642 aa12.93□□□□□ -0.34
ERBB2-206ENST00000578373 PDS5AQ29RF7 1337 aaKnown RBP12.93□□□□□ -0.34
ERBB2-206ENST00000578373 SPAG7O75391 227 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 HERVK_113P62684 666 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 RCSD1Q6JBY9 416 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 GADL1Q6ZQY3 521 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 RNF207Q6ZRF8 634 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 SEPT12Q8IYM1 358 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 SLC35G2Q8TBE7 412 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 FAM167BQ9BTA0 163 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 CNOT10Q9H9A5 744 aaKnown RBP12.92□□□□□ -0.34
ERBB2-206ENST00000578373 TARSL2A2RTX5 802 aaKnown RBP12.92□□□□□ -0.34
ERBB2-206ENST00000578373 RSPH10B2B2RC85 870 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 RSPH10BP0C881 870 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 POLR2BP30876 1174 aaKnown RBP12.92□□□□□ -0.34
ERBB2-206ENST00000578373 MSH2P43246 934 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 VAMP7P51809 220 aa12.92□□□□□ -0.34
ERBB2-206ENST00000578373 EIF3BP55884 814 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms