RNA–Protein interactions for RNA: ENST00000578234.1

SMARCD2-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 2

Gene SMARCD2, Length 595 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-207ENST00000578234 TMEM117Q9H0C3 514 aa14.18□□□□□ -0.14
SMARCD2-207ENST00000578234 CWH43Q9H720 699 aa14.18□□□□□ -0.14
SMARCD2-207ENST00000578234 VPS54Q9P1Q0 977 aa14.18□□□□□ -0.14
SMARCD2-207ENST00000578234 AKT3Q9Y243 479 aa14.18□□□□□ -0.14
SMARCD2-207ENST00000578234 LZTS1Q9Y250 596 aa14.18□□□□□ -0.14
SMARCD2-207ENST00000578234 HOXA2O43364 376 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 GAS7O60861 476 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 OATP04181 439 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 LAG3P18627 525 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 SP100P23497 879 aaPredicted RBP14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 SFNP31947 248 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 MRE11P49959 708 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 JAK3P52333 1124 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 NLRP5P59047 1200 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 ERVFC1P60507 584 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 PLCB3Q01970 1234 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 LLGL2Q6P1M3 1020 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 SLC5A5Q92911 643 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 PBXIP1Q96AQ6 731 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 C22orf23Q9BZE7 217 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 KCNH6Q9H252 994 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 NCOA5Q9HCD5 579 aaKnown RBP14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 HCSTQ9UBK5 93 aa14.17□□□□□ -0.14
SMARCD2-207ENST00000578234 PIEZO1Q92508 2521 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 LOC730098B7Z3J9 87 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 EIF5BO60841 1220 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 PSMD10O75832 226 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 GPC3P51654 580 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 CCT2P78371 535 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 PRKCEQ02156 737 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 TARBP2Q15633 366 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 DUSP6Q16828 381 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 LRCH2Q5VUJ6 765 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 PLPP4Q5VZY2 271 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 LRRC55Q6ZSA7 311 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 RUFY3Q7L099 469 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 LRRC71Q8N4P6 559 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 TMEM87AQ8NBN3 555 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 RDM1Q8NG50 284 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 MRPS27Q92552 414 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 ZNF668Q96K58 619 aaPredicted RBP14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 CASD1Q96PB1 797 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 TEKT3Q9BXF9 490 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 ENTPD7Q9NQZ7 604 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 PUF60Q9UHX1 559 aaKnown RBP14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 USP15Q9Y4E8 981 aaPredicted RBP14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 WDFY4Q6ZS81 3184 aa14.16□□□□□ -0.14
SMARCD2-207ENST00000578234 CYP3A7-CYP3A51PA0A087WV96 503 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 A0A0U1RQF3 1178 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 FSCN2O14926 492 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 EOMESO95936 686 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 DARSP14868 501 aaKnown RBP14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 ATF7P17544 494 aaPredicted RBP14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 CYP3A7P24462 503 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 RBM10P98175 930 aaKnown RBP14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 CDC42EP1Q00587 391 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 NHLH1Q02575 133 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 TBC1D8BQ0IIM8 1120 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 KCNC3Q14003 757 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 CBX2Q14781 532 aaPredicted RBP14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 UGCGQ16739 394 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 Q4G0T1 1027 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 KCNT2Q6UVM3 1135 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 TMEM184AQ6ZMB5 413 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 ECHDC2Q86YB7 292 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 SUGP1Q8IWZ8 645 aaKnown RBP14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 TRIM22Q8IYM9 498 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 ABI1Q8IZP0 508 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 TBCKQ8TEA7 893 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 EDAQ92838 391 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 PHF7Q9BWX1 381 aaPredicted RBP14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 NIFKQ9BYG3 293 aaKnown RBP14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 UNC45AQ9H3U1 944 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 ZSWIM6Q9HCJ5 1215 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 TSHZ2Q9NRE2 1034 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 RNF19AQ9NV58 838 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 PCDHA4Q9UN74 947 aa14.15□□□□□ -0.14
SMARCD2-207ENST00000578234 TMEM221A6NGB7 291 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 M0R296 226 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 CHMP2AO43633 222 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 SRGAP2BP0DMP2 458 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 PPM1AP35813 382 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 TECP42680 631 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 KRT17Q04695 432 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 SSRP1Q08945 709 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 TOB2Q14106 344 aaPredicted RBP14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 XKR3Q5GH77 459 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 MOXD1Q6UVY6 613 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 B3GNT9Q6UX72 402 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 BMP8AQ7Z5Y6 402 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 FAM177A1Q8N128 213 aaPredicted RBP14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 LRRC43Q8N309 656 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 VN1R2Q8NFZ6 395 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 SUSD6Q92537 303 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 ZNF274Q96GC6 653 aaPredicted RBP14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 ZNF558Q96NG5 402 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 LARP6Q9BRS8 491 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 NGRNQ9NPE2 291 aaKnown RBP14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 DACT1Q9NYF0 836 aa14.14□□□□□ -0.15
SMARCD2-207ENST00000578234 CYP46A1Q9Y6A2 500 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms