RNA–Protein interactions for RNA: ENST00000577539.1

VAPA-203, Transcript of VAMP associated protein A, humanhuman

Gene VAPA, Length 3,760 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-203ENST00000577539 VWA3BQ502W6 1294 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 ASPRV1Q53RT3 343 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 HERC4Q5GLZ8 1057 aaPredicted RBP5.9□□□□□ -1.47
VAPA-203ENST00000577539 USP17L6PQ6QN14 398 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 UNC13DQ70J99 1090 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 GSPT2Q8IYD1 628 aaKnown RBP5.9□□□□□ -1.47
VAPA-203ENST00000577539 FRMD6Q96NE9 622 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 PLEKHA4Q9H4M7 779 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 PSTPIP2Q9H939 334 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 PCDH12Q9NPG4 1184 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 LATS2Q9NRM7 1088 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.9□□□□□ -1.47
VAPA-203ENST00000577539 ADAM21Q9UKJ8 722 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 ARAP2Q8WZ64 1704 aa5.9□□□□□ -1.47
VAPA-203ENST00000577539 BUB1O43683 1085 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 MOCS3O95396 460 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 TTLL1O95922 423 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 CAPN2P17655 700 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 TUBB4BP68371 445 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 C2orf54Q08AI8 447 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 MAN2A1Q16706 1144 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 FAM26FQ5R3K3 315 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 NXPE4Q6UWF7 544 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 KCNK18Q7Z418 384 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 ADGRF4Q8IZF3 695 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 MYOCDQ8IZQ8 938 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 TXLNBQ8N3L3 684 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 CUL5Q93034 780 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 PNMA5Q96PV4 448 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 POLD4Q9HCU8 107 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 LRRC4BQ9NT99 713 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 BLOC1S4Q9NUP1 217 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 STK17AQ9UEE5 414 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 PLCH1Q4KWH8 1693 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 COL16A1Q07092 1604 aaPredicted RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 E9PMD0 336 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 EREGO14944 169 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 EPHB6O15197 1021 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 CPNE3O75131 537 aaKnown RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 KIF11P52732 1056 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 MAP9Q49MG5 647 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 LEKR1Q6ZMV7 388 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 KIAA0825Q8IV33 1275 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 MSANTD4Q8NCY6 345 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 RAD54LQ92698 747 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 ZNF622Q969S3 477 aaKnown RBP eCLIP5.89□□□□□ -1.47
VAPA-203ENST00000577539 JMJD4Q9H9V9 463 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 DDX4Q9NQI0 724 aaKnown RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 PANK4Q9NVE7 773 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 MRPL42Q9Y6G3 142 aaKnown RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 LRRC53A6NM62 1247 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 EIF3CLB5ME19 914 aaKnown RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 PSMD14O00487 310 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 ENPP3O14638 875 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 GYS1P13807 737 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 SLC1A4P43007 532 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 NT5C2P49902 561 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 VAV2P52735 878 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 TBX4P57082 545 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 RNASE9P60153 205 aaKnown RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 RASSF7Q02833 373 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 RAPGEF1Q13905 1077 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 TAF1CQ15572 869 aaPredicted RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 TAF3Q5VWG9 929 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 TCERG1LQ5VWI1 586 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 CCDC84Q86UT8 332 aaPredicted RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 GPBP1Q86WP2 473 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 GALNT12Q8IXK2 581 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 CCDC170Q8IYT3 715 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 C1orf127Q8N9H9 656 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 ALS2CR12Q96Q35 445 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 EIF3CQ99613 913 aaKnown RBP5.89□□□□□ -1.47
VAPA-203ENST00000577539 LRRC27Q9C0I9 530 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 RIOX1Q9H6W3 641 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 CCSER2Q9H7U1 834 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 TOR4AQ9NXH8 423 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 SMARCAL1Q9NZC9 954 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 L1RE1Q9UN81 338 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 PCDHA13Q9Y5I0 950 aa5.89□□□□□ -1.47
VAPA-203ENST00000577539 NPHP3-ACAD11A0A0J9YXS1 232 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 FAM170AA1A519 330 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 J3QL48 77 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 GDF9O60383 454 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 IL1R1P14778 569 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 DNAJA1P31689 397 aaKnown RBP5.88□□□□□ -1.47
VAPA-203ENST00000577539 STAT3P40763 770 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 PAFAH1B1P43034 410 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 CRKP46108 304 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 USP14P54578 494 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 POLR2FP61218 127 aaKnown RBP5.88□□□□□ -1.47
VAPA-203ENST00000577539 AMPD2Q01433 879 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 ZNF543Q08ER8 600 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 USH1GQ495M9 461 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 MIIPQ5JXC2 388 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 IQCEQ6IPM2 695 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 CENPPQ6IPU0 288 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 TRAPPC11Q7Z392 1133 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 CCDC65Q8IXS2 484 aa5.88□□□□□ -1.47
VAPA-203ENST00000577539 GUF1Q8N442 669 aaKnown RBP5.88□□□□□ -1.47
VAPA-203ENST00000577539 RHBDD1Q8TEB9 315 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms