RNA–Protein interactions for RNA: ENST00000573710.7

CACNA1A-202, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,569 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-202ENST00000573710 SYTL3Q4VX76 610 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 PNMA1Q8ND90 353 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 GCNT4Q9P109 453 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 NFIBO00712 420 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 OR8K1Q8NGG5 319 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 RASGRP4Q8TDF6 673 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 CYGBQ8WWM9 190 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 TUBGCP2Q9BSJ2 902 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 SPATA1Q5VX52 437 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 ARL8AQ96BM9 186 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 DCUN1D1Q96GG9 259 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 KDM4CQ9H3R0 1056 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 CTNND1O60716 968 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 HSD3B2P26439 372 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 ALDH18A1P54886 795 aaKnown RBP16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 TMPRSS15P98073 1019 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 PLIN5Q00G26 463 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 DDI2Q5TDH0 399 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 RASSF3Q86WH2 238 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 HS6ST3Q8IZP7 471 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 TMEM106CQ9BVX2 250 aa16.91■□□□□ 0.3
CACNA1A-202ENST00000573710 ADGRA2Q96PE1 1338 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 SFI1A8K8P3 1242 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 AOC3Q16853 763 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 SUPT20HL1Q3ZLR7 823 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 RIN3Q8TB24 985 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 FAM167BQ9BTA0 163 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 MAP3K15Q6ZN16 1313 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 C5orf58C9J3I9 102 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 NR2F2P24468 414 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 SLC25A24Q6NUK1 477 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 SMYD4Q8IYR2 804 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 MTBPQ96DY7 904 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 AP1M1Q9BXS5 423 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 MRPS26Q9BYN8 205 aaKnown RBP16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 TOMM20Q15388 145 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 LRRC36Q1X8D7 754 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 GADD45BO75293 160 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 NBPF9Q3BBW0 867 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 BNIPLQ7Z465 357 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 EXD1Q8NHP7 514 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 TRIM11Q96F44 468 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 PCDHB15Q9Y5E8 787 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 CYP19A1P11511 503 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 HDAC4P56524 1084 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 FAM133AQ8N9E0 248 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 ARPP21Q9UBL0 812 aaPredicted RBP16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 NUDT18Q6ZVK8 323 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 BHMTQ93088 406 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 MAP3K5Q99683 1374 aa16.9■□□□□ 0.3
CACNA1A-202ENST00000573710 HMBSP08397 361 aa16.89■□□□□ 0.3
CACNA1A-202ENST00000573710 HOXA13P31271 388 aaPredicted RBP16.89■□□□□ 0.3
CACNA1A-202ENST00000573710 OR6P1Q8NGX9 317 aa16.89■□□□□ 0.3
CACNA1A-202ENST00000573710 PLBD2Q8NHP8 589 aa16.89■□□□□ 0.3
CACNA1A-202ENST00000573710 TTC8Q8TAM2 541 aa16.89■□□□□ 0.3
CACNA1A-202ENST00000573710 CNOT6LQ96LI5 555 aaKnown RBP16.89■□□□□ 0.3
CACNA1A-202ENST00000573710 DCTN4Q9UJW0 460 aa16.89■□□□□ 0.3
CACNA1A-202ENST00000573710 WDR17Q8IZU2 1322 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 ARHGEF37A1IGU5 675 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 LRRC31Q6UY01 552 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 SOS2Q07890 1332 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 PPEF1O14829 653 aaPredicted RBP16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 KCNA2P16389 499 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 GTF2H3Q13889 308 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 NARS2Q96I59 477 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 VPS39Q96JC1 886 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 H2AFZP0C0S5 128 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 ARMC6Q6NXE6 501 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 H2AFVQ71UI9 128 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 ZNF614Q8N883 585 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 TSC22D4Q9Y3Q8 395 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 NOS1P29475 1434 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 MED21Q13503 144 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 TNNQ9UQP3 1299 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 DARSP14868 501 aaKnown RBP16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 PALD1Q9ULE6 856 aa16.89■□□□□ 0.29
CACNA1A-202ENST00000573710 AKT1P31749 480 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 NUP62P37198 522 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 SGO1Q5FBB7 561 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 CCDC60Q8IWA6 550 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 EDC3Q96F86 508 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 HES6Q96HZ4 224 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 ZNF496Q96IT1 587 aaPredicted RBP16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 EXOSC4Q9NPD3 245 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 FTCDO95954 541 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 FEN1P39748 380 aaKnown RBP16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 KCNQ4P56696 695 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 TSPYL6Q8N831 410 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 CCHCR1Q8TD31 782 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 ACCSQ96QU6 501 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 MROH5Q6ZUA9 1318 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 H0Y626 953 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 TRIM16O95361 564 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 ACAD11Q709F0 780 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 THNSL1Q8IYQ7 743 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 ICA1LQ8NDH6 482 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 RGS5O15539 181 aa16.88■□□□□ 0.29
CACNA1A-202ENST00000573710 GUCY2CP25092 1073 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms