RNA–Protein interactions for RNA: ENST00000561330.1

USP8-218, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-218ENST00000561330 BMP8AQ7Z5Y6 402 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 RELTQ969Z4 430 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 KIAA1683Q9H0B3 1180 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 MTG2Q9H4K7 406 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 MAGEL2Q9UJ55 1249 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 SYNPO2Q9UMS6 1093 aa6.6□□□□□ -1.35
USP8-218ENST00000561330 ST20-MTHFSA0A0A6YYL1 179 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 ELL2O00472 640 aaPredicted RBP6.59□□□□□ -1.35
USP8-218ENST00000561330 EPHB4P54760 987 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 ANTXR2P58335 489 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 TBC1D10BQ4KMP7 808 aaPredicted RBP6.59□□□□□ -1.35
USP8-218ENST00000561330 IQSEC1Q6DN90 963 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 LILRA6Q6PI73 481 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 CLRN3Q8NCR9 226 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 CXorf38Q8TB03 319 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 DYDC2Q96IM9 177 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 OR10A2Q9H208 303 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 MCM8Q9UJA3 840 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 FAM184BQ9ULE4 1060 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 VWA7Q9Y334 891 aa6.59□□□□□ -1.35
USP8-218ENST00000561330 A0A0A6YYJ9 748 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 CNOT4O95628 575 aaKnown RBP6.58□□□□□ -1.36
USP8-218ENST00000561330 SESN2P58004 480 aaPredicted RBP6.58□□□□□ -1.36
USP8-218ENST00000561330 TMPRSS15P98073 1019 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 AGBL4Q5VU57 503 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 USP30Q70CQ3 517 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 CXorf67Q86X51 503 aaPredicted RBP6.58□□□□□ -1.36
USP8-218ENST00000561330 BCL6BQ8N143 479 aaPredicted RBP6.58□□□□□ -1.36
USP8-218ENST00000561330 WDR66Q8TBY9 1149 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 NOL10Q9BSC4 688 aaKnown RBP6.58□□□□□ -1.36
USP8-218ENST00000561330 BDH2Q9BUT1 245 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 FAM126AQ9BYI3 521 aaPredicted RBP6.58□□□□□ -1.36
USP8-218ENST00000561330 ANO3Q9BYT9 981 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 PITHD1Q9GZP4 211 aaPredicted RBP6.58□□□□□ -1.36
USP8-218ENST00000561330 SEC61A2Q9H9S3 476 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 DENND2AQ9ULE3 1009 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 NR2E1Q9Y466 385 aa6.58□□□□□ -1.36
USP8-218ENST00000561330 MYPNQ86TC9 1320 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 NPEPPSL1A6NEC2 478 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 ARHGAP6O43182 974 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 GPR39O43194 453 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 OPHN1O60890 802 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 H2AFYO75367 372 aaKnown RBP6.57□□□□□ -1.36
USP8-218ENST00000561330 PCDH8O95206 1070 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 POU3F3P20264 500 aaPredicted RBP6.57□□□□□ -1.36
USP8-218ENST00000561330 RAC3P60763 192 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 FAPQ12884 760 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 ZBTB41Q5SVQ8 909 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 RNF219Q5W0B1 726 aaPredicted RBP6.57□□□□□ -1.36
USP8-218ENST00000561330 SLFN13Q68D06 897 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 KLHDC10Q6PID8 442 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 GLB1LQ6UWU2 654 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 LHFPL2Q6ZUX7 228 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 DDX42Q86XP3 938 aaKnown RBP eCLIP6.57□□□□□ -1.36
USP8-218ENST00000561330 GFM2Q969S9 779 aaKnown RBP6.57□□□□□ -1.36
USP8-218ENST00000561330 WDR92Q96MX6 357 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 WNT8AQ9H1J5 351 aa6.57□□□□□ -1.36
USP8-218ENST00000561330 TOPORSQ9NS56 1045 aaPredicted RBP6.57□□□□□ -1.36
USP8-218ENST00000561330 POLR3BQ9NW08 1133 aaPredicted RBP6.57□□□□□ -1.36
USP8-218ENST00000561330 PRSS38A1L453 326 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 FOXD2O60548 495 aaPredicted RBP6.56□□□□□ -1.36
USP8-218ENST00000561330 SYN1P17600 705 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 PLP2Q04941 152 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 NFYCQ13952 458 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 RNF151Q2KHN1 245 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 SPATS2Q86XZ4 545 aaKnown RBP6.56□□□□□ -1.36
USP8-218ENST00000561330 FAM177A1Q8N128 213 aaPredicted RBP6.56□□□□□ -1.36
USP8-218ENST00000561330 HIST1H2AHQ96KK5 128 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 LMF1Q96S06 567 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 HIST1H2AJQ99878 128 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 KRTAP4-7Q9BYR0 210 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 HAPLN2Q9GZV7 340 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 PPP4R1LQ9P1A2 415 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 ATP8A1Q9Y2Q0 1164 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 PPP2R3BQ9Y5P8 575 aa6.56□□□□□ -1.36
USP8-218ENST00000561330 ITGB3P05106 788 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 MANFP55145 182 aaKnown RBP6.55□□□□□ -1.36
USP8-218ENST00000561330 ADAM15Q13444 863 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 TBR1Q16650 682 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 LIMS2Q7Z4I7 341 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 CDYL2Q8N8U2 506 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 OR14K1Q8NGZ2 314 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 LPPQ93052 612 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 NKD2Q969F2 451 aaPredicted RBP6.55□□□□□ -1.36
USP8-218ENST00000561330 NEIL1Q96FI4 390 aaPredicted RBP6.55□□□□□ -1.36
USP8-218ENST00000561330 LRRC37BQ96QE4 947 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 PTPN18Q99952 460 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 DNAI1Q9UI46 699 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 USP18Q9UMW8 372 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 CTDP1Q9Y5B0 961 aaPredicted RBP6.55□□□□□ -1.36
USP8-218ENST00000561330 PCDHB6Q9Y5E3 794 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 NUMBLQ9Y6R0 609 aa6.55□□□□□ -1.36
USP8-218ENST00000561330 PFKMP08237 780 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 CLEC2LP0C7M8 214 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 PDCD1Q15116 288 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 MAN2A1Q16706 1144 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 CCDC62Q6P9F0 684 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 CIR1Q86X95 450 aaPredicted RBP6.54□□□□□ -1.36
USP8-218ENST00000561330 RSAD2Q8WXG1 361 aa6.54□□□□□ -1.36
USP8-218ENST00000561330 GCDHQ92947 438 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms