RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 ECHDC2Q86YB7 292 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 SMAP1Q8IYB5 467 aaPredicted RBP13.48□□□□□ -0.25
ACTN1-221ENST00000556571 MAP7D2Q96T17 732 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 POMKQ9H5K3 350 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 HCFC2Q9Y5Z7 792 aa13.48□□□□□ -0.25
ACTN1-221ENST00000556571 C2CD4DB7Z1M9 353 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 CLASP2O75122 1294 aaKnown RBP13.47□□□□□ -0.25
ACTN1-221ENST00000556571 BRD1O95696 1058 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 EOMESO95936 686 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 PSAPP07602 524 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
ACTN1-221ENST00000556571 PBX3P40426 434 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 NLRP11P59045 1033 aaKnown RBP13.47□□□□□ -0.25
ACTN1-221ENST00000556571 NECTIN1Q15223 517 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 RTN1Q16799 776 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 APOA5Q6Q788 366 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 TRMT1LQ7Z2T5 733 aaKnown RBP13.47□□□□□ -0.25
ACTN1-221ENST00000556571 SLC39A11Q8N1S5 342 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 FAM167AQ96KS9 214 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 ZNF577Q9BSK1 485 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 ADAMTS10Q9H324 1103 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 TCEAL9Q9UHQ7 104 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 AKT3Q9Y243 479 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 PCDHA10Q9Y5I2 948 aa13.47□□□□□ -0.25
ACTN1-221ENST00000556571 MYO10Q9HD67 2058 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 IGLV3-22A0A075B6J6 115 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 A0A0U1RQF3 1178 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 NBL1P41271 181 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 ALDH7A1P49419 539 aaKnown RBP13.46□□□□□ -0.25
ACTN1-221ENST00000556571 CLCN3P51790 818 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 IRX6P78412 446 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-221ENST00000556571 SETQ01105 290 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-221ENST00000556571 CLLU1OSQ5K130 101 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 ATAT1Q5SQI0 421 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 JAKMIP3Q5VZ66 844 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 MCTP2Q6DN12 878 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
ACTN1-221ENST00000556571 EFCAB12Q6NXP0 572 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 ZDHHC14Q8IZN3 488 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 TMEM105Q8N8V8 129 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 RNF169Q8NCN4 708 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 CRYGNQ8WXF5 182 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 MRPL9Q9BYD2 267 aaKnown RBP13.46□□□□□ -0.25
ACTN1-221ENST00000556571 GABBR1Q9UBS5 961 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 CDH22Q9UJ99 828 aa13.46□□□□□ -0.25
ACTN1-221ENST00000556571 EVPLQ92817 2033 aa13.46□□□□□ -0.26
ACTN1-221ENST00000556571 GVINP1Q7Z2Y8 2422 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 CARNS1A5YM72 827 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 ZBTB43O43298 467 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 CXCL14O95715 111 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 ASCL5Q7RTU5 278 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 ZNF598Q86UK7 904 aaKnown RBP13.45□□□□□ -0.26
ACTN1-221ENST00000556571 LINC01465Q8N7H1 131 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 TDRD5Q8NAT2 981 aaKnown RBP13.45□□□□□ -0.26
ACTN1-221ENST00000556571 TMEM87AQ8NBN3 555 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 RSPH1Q8WYR4 309 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 TMEM169Q96HH4 297 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 NRBP2Q9NSY0 501 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 DZANK1Q9NVP4 752 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 DACT1Q9NYF0 836 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 USTQ9Y2C2 406 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 MYO15AQ9UKN7 3530 aa13.45□□□□□ -0.26
ACTN1-221ENST00000556571 PRR23AA6NEV1 266 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 DARSP14868 501 aaKnown RBP13.44□□□□□ -0.26
ACTN1-221ENST00000556571 CA8P35219 290 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 METAP2P50579 478 aaKnown RBP eCLIP13.44□□□□□ -0.26
ACTN1-221ENST00000556571 CLCN5P51795 746 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 BCAR1P56945 870 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 GIT2Q14161 759 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 RARS2Q5T160 578 aaKnown RBP13.44□□□□□ -0.26
ACTN1-221ENST00000556571 RNF20Q5VTR2 975 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 KIAA1841Q6NSI8 718 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 VPS52Q8N1B4 723 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 LRRC71Q8N4P6 559 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 HELQQ8TDG4 1101 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 ESYT1Q9BSJ8 1104 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 MFSD1Q9H3U5 465 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 CHST12Q9NRB3 414 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 LIMD1Q9UGP4 676 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 DBR1Q9UK59 544 aaKnown RBP13.44□□□□□ -0.26
ACTN1-221ENST00000556571 BRPF3Q9ULD4 1205 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 SAMM50Q9Y512 469 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 IRAK3Q9Y616 596 aa13.44□□□□□ -0.26
ACTN1-221ENST00000556571 GOLGA8AA7E2F4 631 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 GOLGA8BA8MQT2 603 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 WDR64B1ANS9 1081 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 NT5C1B-RDH14C9J2C7 533 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 ASGR2P07307 311 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 WEE2P0C1S8 567 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 GPC3P51654 580 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 RCAN1P53805 252 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 POLGP54098 1239 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-221ENST00000556571 CDC42EP1Q00587 391 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 EXOSC10Q01780 885 aaKnown RBP13.43□□□□□ -0.26
ACTN1-221ENST00000556571 PFKFB3Q16875 520 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-221ENST00000556571 PRR16Q569H4 304 aa13.43□□□□□ -0.26
ACTN1-221ENST00000556571 DHX32Q7L7V1 743 aaKnown RBP13.43□□□□□ -0.26
ACTN1-221ENST00000556571 C12orf76Q8N812 135 aaPredicted RBP13.43□□□□□ -0.26
ACTN1-221ENST00000556571 SCLT1Q96NL6 688 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms