RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 MRPS27Q92552 414 aaKnown RBP15.71■□□□□ 0.11
SNX6-206ENST00000556162 SCLYQ96I15 445 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 CELF4Q9BZC1 486 aaKnown RBP15.71■□□□□ 0.11
SNX6-206ENST00000556162 KCND2Q9NZV8 630 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 GINS2Q9Y248 185 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 TRPV2Q9Y5S1 764 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 CDY2AQ9Y6F7 541 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 PFKFB1P16118 471 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 NLRP11P59045 1033 aaKnown RBP15.71■□□□□ 0.11
SNX6-206ENST00000556162 MXD4Q14582 209 aaPredicted RBP15.71■□□□□ 0.11
SNX6-206ENST00000556162 TRAF7Q6Q0C0 670 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 FSIP1Q8NA03 581 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 DHX58Q96C10 678 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 RUSC1Q9BVN2 902 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 CUEDC2Q9H467 287 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 COL4A3BPQ9Y5P4 624 aa15.71■□□□□ 0.11
SNX6-206ENST00000556162 EVPLQ92817 2033 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 CSF2RAP15509 400 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 RFC2P35250 354 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 ARL2P36404 184 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 MDM2Q00987 491 aaPredicted RBP15.7■□□□□ 0.1
SNX6-206ENST00000556162 MGAT3Q09327 533 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 KIZQ2M2Z5 673 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 CLEC17AQ6ZS10 378 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 GPBP1Q86WP2 473 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 RPUSD2Q8IZ73 545 aaKnown RBP15.7■□□□□ 0.1
SNX6-206ENST00000556162 NLRP7Q8WX94 980 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 SCLT1Q96NL6 688 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 GBP4Q96PP9 640 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 PPP1R16BQ96T49 567 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 TIPINQ9BVW5 301 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 GPRC5CQ9NQ84 441 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 PCDH10Q9P2E7 1040 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 PDE4DIPQ5VU43 2346 aa15.7■□□□□ 0.1
SNX6-206ENST00000556162 FAM237AA0A1B0GTK4 181 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 GPR32O75388 356 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
SNX6-206ENST00000556162 GUCY2CP25092 1073 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 SYKP43405 635 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 GPC3P51654 580 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 CRYBB1P53674 252 aaPredicted RBP15.69■□□□□ 0.1
SNX6-206ENST00000556162 FPGSQ05932 587 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 LAMTOR4Q0VGL1 99 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 PPIGQ13427 754 aaKnown RBP eCLIP15.69■□□□□ 0.1
SNX6-206ENST00000556162 E2F4Q16254 413 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 KSR1Q8IVT5 923 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 TMEM87AQ8NBN3 555 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 KIFAP3Q92845 792 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 POLR3FQ9H1D9 316 aaPredicted RBP15.69■□□□□ 0.1
SNX6-206ENST00000556162 HPSEQ9Y251 543 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 SRGAP2CP0DJJ0 459 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 NDUFA8P51970 172 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 RAD51AP2Q09MP3 1159 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 ARSHQ5FYA8 562 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 ZNF410Q86VK4 478 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 CEP57L1Q8IYX8 460 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 ZNF668Q96K58 619 aaPredicted RBP15.69■□□□□ 0.1
SNX6-206ENST00000556162 NLRP4Q96MN2 994 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 LRRC27Q9C0I9 530 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 ADAMTS10Q9H324 1103 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 CDHR5Q9HBB8 845 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 POLD4Q9HCU8 107 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 CEP290O15078 2479 aa15.69■□□□□ 0.1
SNX6-206ENST00000556162 HIP1RO75146 1068 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 MAGEA10P43363 369 aaPredicted RBP15.68■□□□□ 0.1
SNX6-206ENST00000556162 AMPD3Q01432 767 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 TFDP1Q14186 410 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 MBTPS1Q14703 1052 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 DEFB128Q7Z7B8 93 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 USP38Q8NB14 1042 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 IFT74Q96LB3 600 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 DRC1Q96MC2 740 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 OSMRQ99650 979 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 MAGEF1Q9HAY2 307 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 USP25Q9UHP3 1055 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 SQORQ9Y6N5 450 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 LOXHD1Q8IVV2 1947 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 ARID2Q68CP9 1835 aa15.68■□□□□ 0.1
SNX6-206ENST00000556162 A0A087WZ62 844 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 NBNO60934 754 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 PRPF40AO75400 957 aaKnown RBP15.67■□□□□ 0.1
SNX6-206ENST00000556162 GLRA2P23416 452 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 FBXO47Q5MNV8 452 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 RNF149Q8NC42 400 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 ASAP3Q8TDY4 903 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 FDXACB1Q9BRP7 624 aaPredicted RBP15.67■□□□□ 0.1
SNX6-206ENST00000556162 GCOM2Q9BZD3 368 aaPredicted RBP15.67■□□□□ 0.1
SNX6-206ENST00000556162 TNMDQ9H2S6 317 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 GOLPH3LQ9H4A5 285 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 IL23AQ9NPF7 189 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 NPHP3-ACAD11A0A0J9YXS1 232 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 CXCL10P02778 98 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 PFKMP08237 780 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 SLFN14P0C7P3 912 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 GHRP10912 638 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 EIF4BP23588 611 aaKnown RBP15.67■□□□□ 0.1
SNX6-206ENST00000556162 LPIN1Q14693 890 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 GPNMBQ14956 572 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 PPP2R5AQ15172 486 aa15.67■□□□□ 0.1
SNX6-206ENST00000556162 INO80BQ9C086 356 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 166 ms