RNA–Protein interactions for RNA: ENST00000555904.1

ABCD4-223, Transcript of ATP binding cassette subfamily D member 4, human

TSL 3

Gene ABCD4, Length 582 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCD4-223	ENST00000555904	ARSH	Q5FYA8	562 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	ANKRD33	Q7Z3H0	272 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	SERINC5	Q86VE9	423 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	FAM126B	Q8IXS8	530 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	ZNF710	Q8N1W2	664 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	TMEM143	Q96AN5	459 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	TOX2	Q96NM4	488 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	CEP89	Q96ST8	783 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	C7orf25	Q9BPX7	421 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	TRPV6	Q9H1D0	765 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	BLZF1	Q9H2G9	400 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	CLSTN2	Q9H4D0	955 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	C17orf75	Q9HAS0	396 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	PARVG	Q9HBI0	331 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	EXOC1	Q9NV70	894 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	RMND1	Q9NWS8	449 aa		13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	SUCLA2	Q9P2R7	463 aa	Predicted RBP	13.86	□□□□□ -0.19
ABCD4-223	ENST00000555904	IGKV6-21	A0A0C4DH24	114 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	ASAP2	O43150	1006 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	CAND2	O75155	1236 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	GAP43	P17677	238 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	SMTN	P53814	917 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	RTP1	P59025	263 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	CACNB1	Q02641	598 aa	Predicted RBP	13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	CUL4B	Q13620	913 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	GIT2	Q14161	759 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	ODR4	Q5SWX8	454 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	CCDC183	Q5T5S1	534 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	CNNM4	Q6P4Q7	775 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	SH3RF1	Q7Z6J0	888 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	RHPN2	Q8IUC4	686 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	NME8	Q8N427	588 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	MYCT1	Q8N699	235 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	DNAJB3	Q8WWF6	145 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	PRPF31	Q8WWY3	499 aa	Known RBP	13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	SMARCE1	Q969G3	411 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	ZBTB10	Q96DT7	871 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	HTATIP2	Q9BUP3	242 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	GPRC5C	Q9NQ84	441 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	XPNPEP1	Q9NQW7	623 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	PANK4	Q9NVE7	773 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	SEL1L	Q9UBV2	794 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	ARID2	Q68CP9	1835 aa		13.85	□□□□□ -0.19
ABCD4-223	ENST00000555904	BRCA2	P51587	3418 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	PVALEF	A0A1B0GWK0	134 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904		H0YCG3	227 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	RPN1	P04843	607 aa	Known RBP	13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	PLS3	P13797	630 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	THPO	P40225	353 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	TLE2	Q04725	743 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	LAMTOR4	Q0VGL1	99 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	BFSP2	Q13515	415 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	PNOC	Q13519	176 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	HIC1	Q14526	733 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	LRRC26	Q2I0M4	334 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	CAVIN1	Q6NZI2	390 aa	Known RBP	13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	RUFY4	Q6ZNE9	571 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	UNC13D	Q70J99	1090 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	KIAA0319L	Q8IZA0	1049 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	SLC17A8	Q8NDX2	589 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	CAGE1	Q8TC20	777 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	NLRP7	Q8WX94	980 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	NLRP4	Q96MN2	994 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	PDLIM7	Q9NR12	457 aa		13.84	□□□□□ -0.19
ABCD4-223	ENST00000555904	LRRIQ4	A6NIV6	560 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	CCDC169	A6NNP5	214 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	RSPH10B2	B2RC85	870 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	TRAK2	O60296	914 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	CD4	P01730	458 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	VTN	P04004	478 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	CLTB	P09497	229 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	PRR29	P0C7W0	189 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	RSPH10B	P0C881	870 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	SCP2	P22307	547 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	CASP1	P29466	404 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	ABCD1	P33897	745 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	ARL2	P36404	184 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	NAMPT	P43490	491 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	PHKA2	P46019	1235 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	ZNF131	P52739	623 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	PEX3	P56589	373 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	DPYD	Q12882	1025 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	DRP2	Q13474	957 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	STXBP4	Q6ZWJ1	553 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	UBE2Q1	Q7Z7E8	422 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	RPAIN	Q86UA6	219 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	ZNF410	Q86VK4	478 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	ZBTB8OS	Q8IWT0	167 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	FAM178B	Q8IXR5	827 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	DEPTOR	Q8TB45	409 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	DNAJC19	Q96DA6	116 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	GSDMA	Q96QA5	445 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	GTPBP4	Q9BZE4	634 aa	Known RBP	13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	PRKAG2	Q9UGJ0	569 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	GINS2	Q9Y248	185 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	PHLPP2	Q6ZVD8	1323 aa		13.83	□□□□□ -0.2
ABCD4-223	ENST00000555904	WDR81	Q562E7	1941 aa		13.82	□□□□□ -0.2
ABCD4-223	ENST00000555904	SFI1	A8K8P3	1242 aa		13.82	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 59 ms