RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 CCNA1P78396 465 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 DCAF17Q5H9S7 520 aaPredicted RBP21.62■■□□□ 1.05
SSH1-209ENST00000551165 STXBP4Q6ZWJ1 553 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 ARMCX2Q7L311 632 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 PCIF1Q9H4Z3 704 aa21.62■■□□□ 1.05
SSH1-209ENST00000551165 ADGRA3Q8IWK6 1321 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 GCLCP48506 637 aaPredicted RBP21.61■■□□□ 1.05
SSH1-209ENST00000551165 GTF2BQ00403 316 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 CELF3Q5SZQ8 465 aaKnown RBP21.61■■□□□ 1.05
SSH1-209ENST00000551165 NUP58Q9BVL2 599 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 TIPINQ9BVW5 301 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 NAA15Q9BXJ9 866 aaKnown RBP21.61■■□□□ 1.05
SSH1-209ENST00000551165 IGF2BP3O00425 579 aaKnown RBP eCLIP21.61■■□□□ 1.05
SSH1-209ENST00000551165 DGAT1O75907 488 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 NOL4O94818 638 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 MAPTP10636 758 aaKnown RBP21.61■■□□□ 1.05
SSH1-209ENST00000551165 HS2ST1Q7LGA3 356 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 RDH13Q8NBN7 331 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 RETREG2Q8NC44 543 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 TMEM161BQ8NDZ6 487 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 SEPT1Q8WYJ6 367 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 ZNF592Q92610 1267 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 CEP89Q96ST8 783 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 GPR20Q99678 358 aa21.61■■□□□ 1.05
SSH1-209ENST00000551165 PLXNA1Q9UIW2 1896 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 STAT5BP51692 787 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 ZNF157P51786 506 aaPredicted RBP21.6■■□□□ 1.05
SSH1-209ENST00000551165 ZBED6P86452 979 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 FIGNQ5HY92 759 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 GPR142Q7Z601 462 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 RASAL3Q86YV0 1011 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 ACRBPQ8NEB7 543 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 SLC35C1Q96A29 364 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 TMEM143Q96AN5 459 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 MPHOSPH6Q99547 160 aaKnown RBP21.6■■□□□ 1.05
SSH1-209ENST00000551165 CBWD1Q9BRT8 395 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 CPA4Q9UI42 421 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 ADGRG1Q9Y653 693 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 TXNP10599 105 aaKnown RBP21.6■■□□□ 1.05
SSH1-209ENST00000551165 EPB41P11171 864 aaKnown RBP21.6■■□□□ 1.05
SSH1-209ENST00000551165 MARK3P27448 753 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 NFIL3Q16649 462 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 TCERG1LQ5VWI1 586 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 FAM186BQ8IYM0 893 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 ACCSQ96QU6 501 aa21.6■■□□□ 1.05
SSH1-209ENST00000551165 SLC16A3O15427 465 aaKnown RBP21.59■■□□□ 1.05
SSH1-209ENST00000551165 CYP26C1Q6V0L0 522 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 TMTC1Q8IUR5 882 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 PARK7Q99497 189 aaKnown RBP21.59■■□□□ 1.05
SSH1-209ENST00000551165 LSM14BQ9BX40 385 aaKnown RBP21.59■■□□□ 1.05
SSH1-209ENST00000551165 POLR3FQ9H1D9 316 aaPredicted RBP21.59■■□□□ 1.05
SSH1-209ENST00000551165 ST6GALNAC4Q9H4F1 302 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 ATP6V0A4Q9HBG4 840 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 FAM184BQ9ULE4 1060 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 ACTN1P12814 892 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 XRCC5P13010 732 aaKnown RBP21.59■■□□□ 1.05
SSH1-209ENST00000551165 DMP1Q13316 513 aaPredicted RBP21.59■■□□□ 1.05
SSH1-209ENST00000551165 EMC2Q15006 297 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 KIFAP3Q92845 792 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 KMT5AQ9NQR1 393 aa21.59■■□□□ 1.05
SSH1-209ENST00000551165 A0A1W2PQJ5 194 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 DENND3A2RUS2 1198 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 ANKRD63C9JTQ0 380 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 PSMC2P35998 433 aaKnown RBP21.58■■□□□ 1.05
SSH1-209ENST00000551165 POLGP54098 1239 aaPredicted RBP21.58■■□□□ 1.05
SSH1-209ENST00000551165 TAPT1Q6NXT6 567 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 DHX37Q8IY37 1157 aaKnown RBP21.58■■□□□ 1.05
SSH1-209ENST00000551165 BAP1Q92560 729 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 SPATA33Q96N06 139 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 NLRC4Q9NPP4 1024 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 TBX20Q9UMR3 447 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 USP20Q9Y2K6 914 aa21.58■■□□□ 1.05
SSH1-209ENST00000551165 TRPM7Q96QT4 1865 aa21.58■■□□□ 1.04
SSH1-209ENST00000551165 ASB14A6NK59 587 aa21.58■■□□□ 1.04
SSH1-209ENST00000551165 ABL1P00519 1130 aa21.58■■□□□ 1.04
SSH1-209ENST00000551165 AFPP02771 609 aaKnown RBP21.58■■□□□ 1.04
SSH1-209ENST00000551165 SLC9A1P19634 815 aa21.58■■□□□ 1.04
SSH1-209ENST00000551165 DPY19L2P1Q6NXN4 242 aa21.58■■□□□ 1.04
SSH1-209ENST00000551165 NIFKQ9BYG3 293 aaKnown RBP21.58■■□□□ 1.04
SSH1-209ENST00000551165 TMEM206Q9H813 350 aa21.58■■□□□ 1.04
SSH1-209ENST00000551165 IVNS1ABPQ9Y6Y0 642 aa21.58■■□□□ 1.04
SSH1-209ENST00000551165 FANCGO15287 622 aa21.57■■□□□ 1.04
SSH1-209ENST00000551165 EXOC3O60645 756 aa21.57■■□□□ 1.04
SSH1-209ENST00000551165 PLEKP08567 350 aaPredicted RBP21.57■■□□□ 1.04
SSH1-209ENST00000551165 MEA1Q16626 185 aa21.57■■□□□ 1.04
SSH1-209ENST00000551165 TRIM65Q6PJ69 517 aa21.57■■□□□ 1.04
SSH1-209ENST00000551165 SAPCD2Q86UD0 394 aa21.57■■□□□ 1.04
SSH1-209ENST00000551165 MCPH1Q8NEM0 835 aa21.57■■□□□ 1.04
SSH1-209ENST00000551165 NEK11Q8NG66 645 aa21.57■■□□□ 1.04
SSH1-209ENST00000551165 NTPCRQ9BSD7 190 aaKnown RBP21.57■■□□□ 1.04
SSH1-209ENST00000551165 DHX33Q9H6R0 707 aaKnown RBP21.57■■□□□ 1.04
SSH1-209ENST00000551165 LRRC53A6NM62 1247 aa21.56■■□□□ 1.04
SSH1-209ENST00000551165 ZSCAN12O43309 604 aa21.56■■□□□ 1.04
SSH1-209ENST00000551165 TRIM49P0CI25 452 aa21.56■■□□□ 1.04
SSH1-209ENST00000551165 TRIM49CP0CI26 452 aa21.56■■□□□ 1.04
SSH1-209ENST00000551165 DRP2Q13474 957 aa21.56■■□□□ 1.04
SSH1-209ENST00000551165 ALCAMQ13740 583 aa21.56■■□□□ 1.04
SSH1-209ENST00000551165 TARBP2Q15633 366 aaKnown RBP21.56■■□□□ 1.04
SSH1-209ENST00000551165 FAM110CQ1W6H9 321 aa21.56■■□□□ 1.04
SSH1-209ENST00000551165 MAMDC4Q6UXC1 1216 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms