RNA–Protein interactions for RNA: ENST00000551111.1

PRPF40B-212, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-212ENST00000551111 FSCN2O14926 492 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 PSMD10O75832 226 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 ATF7P17544 494 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 EIF4BP23588 611 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 GPC3P51654 580 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 AKAP17AQ02040 695 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 COASYQ13057 564 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 KCNC3Q14003 757 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 TARBP2Q15633 366 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 PLPP4Q5VZY2 271 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 ECHDC2Q86YB7 292 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 THNSL1Q8IYQ7 743 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 APOL5Q9BWW9 433 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 TLR9Q9NR96 1032 aa13.05□□□□□ -0.32
PRPF40B-212ENST00000551111 MEIS3P2A8K0S8 358 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 LOC730098B7Z3J9 87 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 MAGEB2O15479 319 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 GAS7O60861 476 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 USP11P51784 963 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 NLRP5P59047 1200 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 STK3Q13188 491 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 DUSP6Q16828 381 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 CSPP1Q1MSJ5 1256 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 LONRF3Q496Y0 759 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 HERC4Q5GLZ8 1057 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 LRCH2Q5VUJ6 765 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 B3GNT9Q6UX72 402 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 ZNF598Q86UK7 904 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 RNF169Q8NCN4 708 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 FEZF2Q8TBJ5 459 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 FBXL18Q96ME1 805 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 UPF3BQ9BZI7 483 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 ELAC1Q9H777 363 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 ZSWIM6Q9HCJ5 1215 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 GJB4Q9NTQ9 266 aa13.04□□□□□ -0.32
PRPF40B-212ENST00000551111 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 NT5C1B-RDH14C9J2C7 533 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 EML1O00423 815 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 DARSP14868 501 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 UBE3AQ05086 875 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 MTERF2Q49AM1 385 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 MCTP2Q6DN12 878 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 LLGL2Q6P1M3 1020 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 SYCE2Q6PIF2 218 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 KCNT2Q6UVM3 1135 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 ALYREFQ86V81 257 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 KSR1Q8IVT5 923 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 ZNF579Q8NAF0 562 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 ETNPPLQ8TBG4 499 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 BICD2Q8TD16 824 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 HELQQ8TDG4 1101 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 SUSD6Q92537 303 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 FAM167AQ96KS9 214 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 MAP7D2Q96T17 732 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 RIT2Q99578 217 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 TMEM117Q9H0C3 514 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 S1PR5Q9H228 398 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 SH3GLB2Q9NR46 395 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 NRBP2Q9NSY0 501 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 TCEAL9Q9UHQ7 104 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 PCDHA4Q9UN74 947 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 KCNJ14Q9UNX9 436 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
PRPF40B-212ENST00000551111 DOCK6Q96HP0 2047 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 CYP3A7-CYP3A51PA0A087WV96 503 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 IGKV6-21A0A0C4DH24 114 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 SLC37A4O43826 429 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 LAG3P18627 525 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 SP100P23497 879 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 CYP3A7P24462 503 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 PLCB3Q01970 1234 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 SSRP1Q08945 709 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 TBC1D8BQ0IIM8 1120 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 Q4G0T1 1027 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 ODR4Q5SWX8 454 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 IER5LQ5T953 404 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 MIER3Q7Z3K6 550 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 TMEM173Q86WV6 379 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 BLIDQ8IZY5 108 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 MRPS27Q92552 414 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 EDAQ92838 391 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 LPPQ93052 612 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 PPP2R3CQ969Q6 453 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 RPGRIP1Q96KN7 1286 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 MBOAT7Q96N66 472 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 TCF25Q9BQ70 676 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 TEKT3Q9BXF9 490 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 NIFKQ9BYG3 293 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 AAASQ9NRG9 546 aa13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 WRAP73Q9P2S5 460 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 SEPT9Q9UHD8 586 aaPredicted RBP13.02□□□□□ -0.33
PRPF40B-212ENST00000551111 TDRD15B5MCY1 1934 aaKnown RBP13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 A0A087WZ62 844 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 A0A0U1RQF3 1178 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 B4GALT3O60512 393 aa13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 ZSCAN20P17040 1043 aaPredicted RBP13.01□□□□□ -0.33
PRPF40B-212ENST00000551111 PSMA5P28066 241 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms