RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 TMEM87AQ8NBN3 555 aa23.81■■□□□ 1.4
NEK3-202ENST00000550841 TMEM143Q96AN5 459 aa23.81■■□□□ 1.4
NEK3-202ENST00000550841 CELF4Q9BZC1 486 aaKnown RBP23.81■■□□□ 1.4
NEK3-202ENST00000550841 MAGEF1Q9HAY2 307 aa23.81■■□□□ 1.4
NEK3-202ENST00000550841 BMP2KQ9NSY1 1161 aaPredicted RBP23.81■■□□□ 1.4
NEK3-202ENST00000550841 TRPV2Q9Y5S1 764 aa23.81■■□□□ 1.4
NEK3-202ENST00000550841 FAM237AA0A1B0GTK4 181 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 A0A1B0GVL5 298 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 PFKFB1P16118 471 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 CCL23P55773 120 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 AMPD3Q01432 767 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 MKRN4PQ13434 485 aaPredicted RBP23.8■■□□□ 1.4
NEK3-202ENST00000550841 FAM102BQ5T8I3 360 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 RPUSD2Q8IZ73 545 aaKnown RBP23.8■■□□□ 1.4
NEK3-202ENST00000550841 FSIP1Q8NA03 581 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 KIFAP3Q92845 792 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 DHX58Q96C10 678 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 XPNPEP1Q9NQW7 623 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 KCNG1Q9UIX4 513 aa23.8■■□□□ 1.4
NEK3-202ENST00000550841 A0A087X0B3 334 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 VTNP04004 478 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 GUCY2CP25092 1073 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 ARL2P36404 184 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 SYKP43405 635 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 CRYBB1P53674 252 aaPredicted RBP23.79■■□□□ 1.4
NEK3-202ENST00000550841 DHX8Q14562 1220 aaKnown RBP23.79■■□□□ 1.4
NEK3-202ENST00000550841 NAALADL2Q58DX5 795 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 RHPN2Q8IUC4 686 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 CEP57L1Q8IYX8 460 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 PRPF31Q8WWY3 499 aaKnown RBP23.79■■□□□ 1.4
NEK3-202ENST00000550841 HPSEQ9Y251 543 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 CDY2AQ9Y6F7 541 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 SQORQ9Y6N5 450 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 ARID2Q68CP9 1835 aa23.79■■□□□ 1.4
NEK3-202ENST00000550841 SOX1O00570 391 aaPredicted RBP23.78■■□□□ 1.4
NEK3-202ENST00000550841 CHRNA1P02708 482 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 CTSHP09668 335 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 ITGB8P26012 769 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 NLRP11P59045 1033 aaKnown RBP23.78■■□□□ 1.4
NEK3-202ENST00000550841 MGAT3Q09327 533 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 PPIGQ13427 754 aaKnown RBP eCLIP23.78■■□□□ 1.46e-8■■□□□ 12.7
NEK3-202ENST00000550841 DRP2Q13474 957 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 TFDP1Q14186 410 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 TPRNQ4KMQ1 711 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 MAEAQ7L5Y9 396 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 ZNF410Q86VK4 478 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 GPBP1Q86WP2 473 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 USP38Q8NB14 1042 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 BADQ92934 168 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 CCDC34Q96HJ3 373 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 DRC1Q96MC2 740 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 COL4A3BPQ9Y5P4 624 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 UMODL1Q5DID0 1318 aa23.78■■□□□ 1.4
NEK3-202ENST00000550841 GPR32O75388 356 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 KRT18P05783 430 aaKnown RBP23.77■■□□□ 1.4
NEK3-202ENST00000550841 MAGEA10P43363 369 aaPredicted RBP23.77■■□□□ 1.4
NEK3-202ENST00000550841 GPC3P51654 580 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 FPGSQ05932 587 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 POU5F1BQ06416 359 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 TMEM62Q0P6H9 643 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 LAMTOR4Q0VGL1 99 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 PPP2R5AQ15172 486 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 E2F4Q16254 413 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 ODR4Q5SWX8 454 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 TRAF7Q6Q0C0 670 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 FAM43BQ6ZT52 329 aaPredicted RBP23.77■■□□□ 1.4
NEK3-202ENST00000550841 LRRC15Q8TF66 581 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 NLRP7Q8WX94 980 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 LRCH3Q96II8 777 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 IFT74Q96LB3 600 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 SCLT1Q96NL6 688 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 RUSC1Q9BVN2 902 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 INO80BQ9C086 356 aaPredicted RBP23.77■■□□□ 1.4
NEK3-202ENST00000550841 POLR3FQ9H1D9 316 aaPredicted RBP23.77■■□□□ 1.4
NEK3-202ENST00000550841 WNT8AQ9H1J5 351 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 TNMDQ9H2S6 317 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 C17orf75Q9HAS0 396 aa23.77■■□□□ 1.4
NEK3-202ENST00000550841 GOLGA6L22H0YM25 854 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 PFKMP08237 780 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 SLFN14P0C7P3 912 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 NDUFA8P51970 172 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 KIZQ2M2Z5 673 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 SCLYQ96I15 445 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 GCOM2Q9BZD3 368 aaPredicted RBP23.76■■□□□ 1.39
NEK3-202ENST00000550841 ADAMTS10Q9H324 1103 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 ODF2LQ9ULJ1 636 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 GINS2Q9Y248 185 aa23.76■■□□□ 1.39
NEK3-202ENST00000550841 HIP1RO75146 1068 aa23.75■■□□□ 1.39
NEK3-202ENST00000550841 PRPF40AO75400 957 aaKnown RBP23.75■■□□□ 1.39
NEK3-202ENST00000550841 UBE2HP62256 183 aa23.75■■□□□ 1.39
NEK3-202ENST00000550841 ARSHQ5FYA8 562 aa23.75■■□□□ 1.39
NEK3-202ENST00000550841 UBE2OQ9C0C9 1292 aaKnown RBP23.75■■□□□ 1.39
NEK3-202ENST00000550841 KBTBD4Q9NVX7 518 aa23.75■■□□□ 1.39
NEK3-202ENST00000550841 DNAH12Q6ZR08 3092 aa23.74■■□□□ 1.39
NEK3-202ENST00000550841 SRGAP2CP0DJJ0 459 aa23.74■■□□□ 1.39
NEK3-202ENST00000550841 CSF2RAP15509 400 aa23.74■■□□□ 1.39
NEK3-202ENST00000550841 FBXO47Q5MNV8 452 aa23.74■■□□□ 1.39
NEK3-202ENST00000550841 NLRP4Q96MN2 994 aa23.74■■□□□ 1.39
NEK3-202ENST00000550841 IL23AQ9NPF7 189 aa23.74■■□□□ 1.39
NEK3-202ENST00000550841 GPRC5CQ9NQ84 441 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms