RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 SEC31BQ9NQW1 1179 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 HEG1Q9ULI3 1381 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 LAMC1P11047 1609 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 MROH7-TTC4A0A0A0MT08 1334 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 EEF1DP29692 281 aaKnown RBP16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 DARS2Q6PI48 645 aaKnown RBP16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 RGS9BPQ6ZS82 235 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 SYNE4Q8N205 404 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 RFFLQ8WZ73 363 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 NRBF2Q96F24 287 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 SEPT10Q9P0V9 454 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 POTEMA6NI47 508 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 GOLGA8SH3BPF8 625 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 TNNC2P02585 160 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 FGFR4P22455 802 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 GTF2IP78347 998 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 ALX1Q15699 326 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 SLC18A3Q16572 532 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 KIAA1755Q5JYT7 1200 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 PDZD4Q76G19 769 aaPredicted RBP16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 TRIM59Q8IWR1 403 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 HEMGNQ9BXL5 484 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 CALN1Q9BXU9 219 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 BHMT2Q9H2M3 363 aa16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 CNOT8Q9UFF9 292 aaKnown RBP16.92■□□□□ 0.3
RBFOX1-212ENST00000550418 HNRNPCL1O60812 293 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 TMEM191BP0C7N4 346 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 TMEM154Q6P9G4 183 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 ENAHQ8N8S7 591 aaPredicted RBP16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 BRDTQ58F21 947 aaPredicted RBP16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 TESPA1A2RU30 521 aaPredicted RBP16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 RAD51CO43502 376 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 NR3C1P04150 777 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 FCER1AP12319 257 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 FDPSP14324 419 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 GUCY1A2P33402 732 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 YARSP54577 528 aaKnown RBP16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 COASYQ13057 564 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 DNAJC9Q8WXX5 260 aa16.91■□□□□ 0.3
RBFOX1-212ENST00000550418 TJP3O95049 919 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 ICA1Q05084 483 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 USP49Q70CQ1 688 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 TRAPPC11Q7Z392 1133 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 RAD54LQ92698 747 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 WDR11Q9BZH6 1224 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 MYO3AQ8NEV4 1616 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 NOP56O00567 594 aaKnown RBP16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 USP17L8P0C7I0 530 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 PDCD2Q16342 344 aaPredicted RBP16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 ARHGAP27Q6ZUM4 889 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 PACS2Q86VP3 889 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 KIF2BQ8N4N8 673 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 DONSONQ9NYP3 566 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 BAG5Q9UL15 447 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 USP31Q70CQ4 1352 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 ZBED4O75132 1171 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 KLHL38Q2WGJ6 581 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 C3orf20Q8ND61 904 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 BRIP1Q9BX63 1249 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 HESX1Q9UBX0 185 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 TAF6LQ9Y6J9 622 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 ADGRB1O14514 1584 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 USP17L3A6NCW0 530 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 USP17L4A6NCW7 530 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 CTDNEP1O95476 244 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 UBE2SQ16763 222 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 CERKLQ49MI3 558 aaPredicted RBP16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 USP17L1Q7RTZ2 530 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 NLGN1Q8N2Q7 840 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 HDAC11Q96DB2 347 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 CFAP36Q96G28 342 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 CCDC68Q9H2F9 335 aa16.9■□□□□ 0.3
RBFOX1-212ENST00000550418 A6NJR5 290 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 NVLO15381 856 aaKnown RBP16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 TTLL1O95922 423 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 DTX3LQ8TDB6 740 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 ARL8AQ96BM9 186 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 DYNLL2Q96FJ2 89 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 VCPKMTQ9H867 229 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 GINS2Q9Y248 185 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 ZNF711Q9Y462 761 aa16.89■□□□□ 0.3
RBFOX1-212ENST00000550418 SNAP23O00161 211 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 GGPS1O95749 300 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 KCNA3P22001 575 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 PGM1P36871 562 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 NT5C2P49902 561 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 NCAPHQ15003 741 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 GLYCTKQ8IVS8 523 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 LRRN4CLQ8ND94 238 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 ICA1LQ8NDH6 482 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 TTLL11Q8NHH1 800 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 ISCUQ9H1K1 167 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 PPP1R12AO14974 1030 aaPredicted RBP16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 NLRP10Q86W26 655 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 SUPT20HQ8NEM7 779 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 SNF8Q96H20 258 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 TRIM51Q9BSJ1 452 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 TMOD4Q9NZQ9 345 aa16.89■□□□□ 0.29
RBFOX1-212ENST00000550418 IGF2BP3O00425 579 aaKnown RBP eCLIP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms