RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 EIF2AK2P19525 551 aaKnown RBP20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 RPS6P62753 249 aaKnown RBP20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 MTMR1Q13613 665 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 MTMR2Q13614 643 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 TNFAIP1Q13829 316 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 TNIP1Q15025 636 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 VIPAS39Q9H9C1 493 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 PPP1R9AQ9ULJ8 1098 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 SAMM50Q9Y512 469 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 K7ENM7 598 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 GFPT2O94808 682 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 RARRES1P49788 294 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 SLC7A5Q01650 507 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 CFAP221Q4G0U5 840 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 DALRD3Q5D0E6 543 aaKnown RBP20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 SYCP3Q8IZU3 236 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 ADAM21Q9UKJ8 722 aa20.22■□□□□ 0.83
PRPF40B-208ENST00000548436 COL11A1P12107 1806 aaPredicted RBP20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 NFKBIEO00221 500 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 TGFB2P61812 414 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 PGM5Q15124 567 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 SAMD7Q7Z3H4 446 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 SLC9A9Q8IVB4 645 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 RDH13Q8NBN7 331 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 GOLGA5Q8TBA6 731 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 SH2D3AQ9BRG2 576 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 SELENOOQ9BVL4 669 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 DBR1Q9UK59 544 aaKnown RBP20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 HPCAL4Q9UM19 191 aa20.21■□□□□ 0.83
PRPF40B-208ENST00000548436 ZC3H4Q9UPT8 1303 aaKnown RBP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 TISP43B9A030 160 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 DDX3XO00571 662 aaKnown RBP eCLIP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 EVI5O60447 810 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 QARSP47897 775 aaKnown RBP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 PPP2R5AQ15172 486 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 OLIG1Q8TAK6 271 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 AENQ8WTP8 325 aaKnown RBP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 CCDC102AQ96A19 550 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 RPAP3Q9H6T3 665 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 VPS18Q9P253 973 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 RNF14Q9UBS8 474 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 DOCK1Q14185 1865 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 TMEM150BA6NC51 233 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 F8VZ95 297 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 EXOC3O60645 756 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 MYCLP12524 364 aaPredicted RBP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 FERP16591 822 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 ANXA13P27216 316 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 STAT1P42224 750 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 BFSP1Q12934 665 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 UGCGQ16739 394 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 WNK4Q96J92 1243 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 STK33Q9BYT3 514 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 GPR88Q9GZN0 384 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 GOLPH3Q9H4A6 298 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 MAP3K20Q9NYL2 800 aaKnown RBP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 LARSQ9P2J5 1176 aaKnown RBP20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 DNAJC12Q9UKB3 198 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 FAN1Q9Y2M0 1017 aa20.2■□□□□ 0.82
PRPF40B-208ENST00000548436 KIAA1217Q5T5P2 1943 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 ERICH4A6NGS2 130 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 ATP9AO75110 1047 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 SOX5P35711 763 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 DRAP1Q14919 205 aaPredicted RBP20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 RUBCNQ92622 972 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 INPP4AQ96PE3 977 aaPredicted RBP20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 TRERF1Q96PN7 1200 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 INTS2Q9H0H0 1204 aaKnown RBP20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 ACBD3Q9H3P7 528 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 TBC1D22BQ9NU19 505 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 GINM1Q9NU53 330 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 RLFQ13129 1914 aa20.19■□□□□ 0.82
PRPF40B-208ENST00000548436 LYPLA2O95372 231 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 YWHABP31946 246 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 AARSP49588 968 aaKnown RBP eCLIP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 NBPF12Q5TAG4 269 aaPredicted RBP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 LRRC57Q8N9N7 239 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 LNX1Q8TBB1 728 aaPredicted RBP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 RMDN3Q96TC7 470 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 PCIF1Q9H4Z3 704 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 HACL1Q9UJ83 578 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 ZBTB7AO95365 584 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 SYF2O95926 243 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 MAPTP10636 758 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 PLS3P13797 630 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 NOP2P46087 812 aaKnown RBP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 MYL7Q01449 175 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 TBC1D10BQ4KMP7 808 aaPredicted RBP20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 VPS36Q86VN1 386 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 MICALL2Q8IY33 904 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 SLC30A5Q8TAD4 765 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 FAM71BQ8TC56 605 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 PDCD2LQ9BRP1 358 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 PXMP2Q9NR77 195 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 STIM2Q9P246 746 aa20.18■□□□□ 0.82
PRPF40B-208ENST00000548436 ATP8B3O60423 1300 aa20.17■□□□□ 0.82
PRPF40B-208ENST00000548436 RPS12P25398 132 aaKnown RBP20.17■□□□□ 0.82
PRPF40B-208ENST00000548436 GMPSP49915 693 aaPredicted RBP20.17■□□□□ 0.82
PRPF40B-208ENST00000548436 DLG4P78352 724 aa20.17■□□□□ 0.82
PRPF40B-208ENST00000548436 MYBPC2Q14324 1141 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms