RNA–Protein interactions for RNA: ENST00000545026.1

LEMD3-206, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-206ENST00000545026 A0A0A6YYJ9 748 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 TEX51A0A1B0GUA7 166 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 GOLGA6CA6NDK9 693 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 GOLGA6BA6NDN3 693 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 MAFO75444 373 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-206ENST00000545026 CELA3BP08861 270 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 GOLGA6DP0CG33 693 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 U2AF1L5P0DN76 240 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-206ENST00000545026 PFKLP17858 780 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 VCAM1P19320 739 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 GNALP38405 381 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 GLRBP48167 497 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 SLC5A3P53794 718 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 U2AF1Q01081 240 aaKnown RBP eCLIP8.31□□□□□ -1.08
LEMD3-206ENST00000545026 RTP5Q14D33 572 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 EPM2AIP1Q7L775 607 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-206ENST00000545026 PCDH18Q9HCL0 1135 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 GOLGA6AQ9NYA3 693 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 ZFP69BQ9UJL9 534 aa8.31□□□□□ -1.08
LEMD3-206ENST00000545026 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.31□□□□□ -1.08
LEMD3-206ENST00000545026 OPHN1O60890 802 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 NDUFS2O75306 463 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 LPOP22079 712 aaPredicted RBP8.3□□□□□ -1.08
LEMD3-206ENST00000545026 NFATC3Q12968 1075 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 GTF2H3Q13889 308 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 GFOD2Q3B7J2 385 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 STK32CQ86UX6 486 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 OR14C36Q8NHC7 312 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 AIFM3Q96NN9 605 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 NOX5Q96PH1 765 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 TACO1Q9BSH4 297 aaKnown RBP8.3□□□□□ -1.08
LEMD3-206ENST00000545026 SGPP1Q9BX95 441 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 IFT122Q9HBG6 1241 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 ANLNQ9NQW6 1124 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 KCND1Q9NSA2 647 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 FAM53CQ9NYF3 392 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 KCMF1Q9P0J7 381 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 FTSJ1Q9UET6 329 aa8.3□□□□□ -1.08
LEMD3-206ENST00000545026 CCDC194A0A1B0GVG4 234 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 EPHB3P54753 998 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 ADKP55263 362 aaKnown RBP8.29□□□□□ -1.08
LEMD3-206ENST00000545026 CD83Q01151 205 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 PPARAQ07869 468 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 RRP12Q5JTH9 1297 aaKnown RBP8.29□□□□□ -1.08
LEMD3-206ENST00000545026 MBNL2Q5VZF2 373 aaKnown RBP8.29□□□□□ -1.08
LEMD3-206ENST00000545026 NBPF11Q86T75 865 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 STPG3Q8N7X2 389 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 C11orf84Q9BUA3 381 aaPredicted RBP8.29□□□□□ -1.08
LEMD3-206ENST00000545026 GCM1Q9NP62 436 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 USP18Q9UMW8 372 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 PCDHB6Q9Y5E3 794 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 CDY2AQ9Y6F7 541 aa8.29□□□□□ -1.08
LEMD3-206ENST00000545026 N4BP3O15049 544 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 AKAP5P24588 427 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 FOXO4P98177 505 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 CDK17Q00537 523 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 SPIDRQ14159 915 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 MINDY4Q4G0A6 757 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 TMEM132EQ6IEE7 984 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 CXXC5Q7LFL8 322 aaKnown RBP8.28□□□□□ -1.08
LEMD3-206ENST00000545026 CCDC146Q8IYE0 955 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 LINC00482Q8N8I6 264 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 CDYL2Q8N8U2 506 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 WDR48Q8TAF3 677 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 GAB3Q8WWW8 586 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 CLIP3Q96DZ5 547 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 ZSWIM3Q96MP5 696 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 CLIC6Q96NY7 704 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 HAPLN2Q9GZV7 340 aa8.28□□□□□ -1.08
LEMD3-206ENST00000545026 EVLQ9UI08 416 aaPredicted RBP8.28□□□□□ -1.08
LEMD3-206ENST00000545026 VSTM5A8MXK1 200 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 MAFGO15525 162 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 SEMA7AO75326 666 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 MAP4K4O95819 1239 aaPredicted RBP8.27□□□□□ -1.09
LEMD3-206ENST00000545026 GPR15P49685 360 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 MLANAQ16655 118 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 ANO4Q32M45 955 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 DPP8Q6V1X1 898 aaPredicted RBP8.27□□□□□ -1.09
LEMD3-206ENST00000545026 GAREM2Q75VX8 874 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 BMP8AQ7Z5Y6 402 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 PPM1NQ8N819 430 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 KYQ8NBH2 561 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 OR5AN1Q8NGI8 311 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 LRGUKQ96M69 825 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 NOL10Q9BSC4 688 aaKnown RBP8.27□□□□□ -1.09
LEMD3-206ENST00000545026 CSRNP2Q9H175 543 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 SLC12A5Q9H2X9 1139 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 OBP2AQ9NY56 170 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 SERPINB13Q9UIV8 391 aa8.27□□□□□ -1.09
LEMD3-206ENST00000545026 CUTAO60888 179 aa8.26□□□□□ -1.09
LEMD3-206ENST00000545026 IRAK1P51617 712 aa8.26□□□□□ -1.09
LEMD3-206ENST00000545026 CCSAPQ6IQ19 270 aaPredicted RBP8.26□□□□□ -1.09
LEMD3-206ENST00000545026 MIER2Q8N344 545 aa8.26□□□□□ -1.09
LEMD3-206ENST00000545026 TTLL6Q8N841 843 aa8.26□□□□□ -1.09
LEMD3-206ENST00000545026 ACE2Q9BYF1 805 aaPredicted RBP8.26□□□□□ -1.09
LEMD3-206ENST00000545026 A0A0A6YYK5 440 aaPredicted RBP8.25□□□□□ -1.09
LEMD3-206ENST00000545026 CAND2O75155 1236 aa8.25□□□□□ -1.09
LEMD3-206ENST00000545026 LIMS1P48059 325 aa8.25□□□□□ -1.09
LEMD3-206ENST00000545026 ANTXR2P58335 489 aa8.25□□□□□ -1.09
LEMD3-206ENST00000545026 CCT2P78371 535 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms