RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 LINC00469Q8N7U9 141 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 NR1H4Q96RI1 486 aaPredicted RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 UBE2OQ9C0C9 1292 aaKnown RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 XPO4Q9C0E2 1151 aaKnown RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 IL17RBQ9NRM6 502 aa13.68□□□□□ -0.22
DDX55-206ENST00000539934 ZNF70Q9UC06 446 aaPredicted RBP13.68□□□□□ -0.22
DDX55-206ENST00000539934 A0A0B4J203 849 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 ZSCAN12O43309 604 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 LINGO3P0C6S8 592 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 RASA1P20936 1047 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 PEX5P50542 639 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 FIP1L1Q6UN15 594 aaKnown RBP13.67□□□□□ -0.22
DDX55-206ENST00000539934 CCDC121Q6ZUS5 278 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 SYT2Q8N9I0 419 aaPredicted RBP13.67□□□□□ -0.22
DDX55-206ENST00000539934 MTMR14Q8NCE2 650 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 PNMA1Q8ND90 353 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 TEPSINQ96N21 525 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 CLSTN2Q9H4D0 955 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 ARFGAP3Q9NP61 516 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 TCF7L2Q9NQB0 619 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 USP40Q9NVE5 1235 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 SLC5A4Q9NY91 659 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 PCDHA7Q9UN72 937 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 STX8Q9UNK0 236 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 PPP2R3BQ9Y5P8 575 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 V9GY48 417 aaPredicted RBP13.67□□□□□ -0.22
DDX55-206ENST00000539934 MUC3AQ02505 3323 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 BAZ2BQ9UIF8 2168 aaKnown RBP13.67□□□□□ -0.22
DDX55-206ENST00000539934 A0A1B0GVG6 124 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 hCG_1642624A0A1W2PR95 340 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 BTBD18B2RXH4 712 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 BTF3P20290 206 aaKnown RBP13.67□□□□□ -0.22
DDX55-206ENST00000539934 LACTBP83111 547 aaPredicted RBP13.67□□□□□ -0.22
DDX55-206ENST00000539934 HHIPL2Q6UWX4 724 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 NOSTRINQ8IVI9 506 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 FSIP1Q8NA03 581 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 SVIPQ8NHG7 77 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 UBXN4Q92575 508 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 ASIC4Q96FT7 647 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 LRCH3Q96II8 777 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 EIF2AQ9BY44 585 aaKnown RBP13.67□□□□□ -0.22
DDX55-206ENST00000539934 TCP11L1Q9NUJ3 509 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 WDR70Q9NW82 654 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 CPA4Q9UI42 421 aa13.67□□□□□ -0.22
DDX55-206ENST00000539934 SPTBN5Q9NRC6 3674 aaKnown RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 CCDC192P0DO97 292 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CNGA1P29973 690 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CCT6AP40227 531 aaKnown RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 ARHGAP25P42331 645 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 FUT2Q10981 343 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 DEPTORQ8TB45 409 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 GIPC2Q8TF65 315 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CGREF1Q99674 301 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 FOXP1Q9H334 677 aaPredicted RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 LZTS1Q9Y250 596 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CNTNAP5Q8WYK1 1306 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 BTBD19C9JJ37 291 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 MYO1FO00160 1098 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 SOX1O00570 391 aaPredicted RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 MGRN1O60291 552 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CRKP46108 304 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 FAM160A1Q05DH4 1040 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 LRP8Q14114 963 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CFAP157Q5JU67 520 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 C14orf80Q86SX3 495 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 NT5DC4Q86YG4 428 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CKAP2LQ8IYA6 745 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 SRBD1Q8N5C6 995 aaKnown RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 GDAP1Q8TB36 358 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 CACTINQ8WUQ7 758 aaKnown RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 MRPS27Q92552 414 aaKnown RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 ANKS1AQ92625 1134 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 FUCA2Q9BTY2 467 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 VPS54Q9P1Q0 977 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 ZNF148Q9UQR1 794 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.66□□□□□ -0.22
DDX55-206ENST00000539934 SH3GLB1Q9Y371 365 aa13.66□□□□□ -0.22
DDX55-206ENST00000539934 TLR2O60603 784 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 MLH1P40692 756 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 GTF2A2P52657 109 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 BLMHQ13867 455 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 TMEM53Q6P2H8 277 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 YTHDF3Q7Z739 585 aaKnown RBP13.65□□□□□ -0.22
DDX55-206ENST00000539934 BRSK2Q8IWQ3 736 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 LRRC43Q8N309 656 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 C1orf74Q96LT6 269 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 IER2Q9BTL4 223 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 GOLPH3LQ9H4A5 285 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 PREBQ9HCU5 417 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 WDR35Q9P2L0 1181 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 STK39Q9UEW8 545 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 TBK1Q9UHD2 729 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 DAAM1Q9Y4D1 1078 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 CSADQ9Y600 493 aa13.65□□□□□ -0.22
DDX55-206ENST00000539934 A0A1W2PQ27 194 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 A0A1W2PQ64 194 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 A0A1W2PQD8 194 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 DIAPH2O60879 1101 aa13.64□□□□□ -0.23
DDX55-206ENST00000539934 FKBP1AP62942 108 aaKnown RBP13.64□□□□□ -0.23
DDX55-206ENST00000539934 IFFO1Q0D2I5 559 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms