RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 LRRC1Q9BTT6 524 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 ST6GALNAC4Q9H4F1 302 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 MED4Q9NPJ6 270 aa19.55■□□□□ 0.72
GNE-204ENST00000539208 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.55■□□□□ 0.72
GNE-204ENST00000539208 EGFRP00533 1210 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 CYP2J2P51589 502 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 RPS6P62753 249 aaKnown RBP19.54■□□□□ 0.72
GNE-204ENST00000539208 TAAR1Q96RJ0 339 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 PSMB7Q99436 277 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 A0A0A6YYK5 440 aaPredicted RBP19.54■□□□□ 0.72
GNE-204ENST00000539208 PLS3P13797 630 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 SOX5P35711 763 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 XRRA1Q6P2D8 792 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 C4orf19Q8IY42 314 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 PKD2L1Q9P0L9 805 aa19.54■□□□□ 0.72
GNE-204ENST00000539208 SCAF8Q9UPN6 1271 aaKnown RBP19.54■□□□□ 0.72
GNE-204ENST00000539208 F8VZ95 297 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 K7ENM7 598 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 EXOC3O60645 756 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 SNRPFP62306 86 aaKnown RBP19.53■□□□□ 0.72
GNE-204ENST00000539208 BFSP1Q12934 665 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 GJB7Q6PEY0 223 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 FAM71BQ8TC56 605 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 AENQ8WTP8 325 aaKnown RBP19.53■□□□□ 0.72
GNE-204ENST00000539208 ACCSQ96QU6 501 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 RPAP3Q9H6T3 665 aaPredicted RBP19.53■□□□□ 0.72
GNE-204ENST00000539208 CTDP1Q9Y5B0 961 aaPredicted RBP19.53■□□□□ 0.72
GNE-204ENST00000539208 NFKBIEO00221 500 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 ZMYND10O75800 440 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 FTCDO95954 541 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 RFX1P22670 979 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 TNFRSF8P28908 595 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 JAK3P52333 1124 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 MTMR2Q13614 643 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 CBWD6Q4V339 395 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 CBWD3Q5JTY5 395 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 CBWD5Q5RIA9 395 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 SLC30A5Q8TAD4 765 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 EXOC4Q96A65 974 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 TRERF1Q96PN7 1200 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 PDCD2LQ9BRP1 358 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 PSD3Q9NYI0 1048 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 SAMM50Q9Y512 469 aa19.53■□□□□ 0.72
GNE-204ENST00000539208 DDX3XO00571 662 aaKnown RBP eCLIP19.52■□□□□ 0.724e-20■■■■■ 36.3
GNE-204ENST00000539208 MYBL2P10244 700 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 EIF2AK2P19525 551 aaKnown RBP19.52■□□□□ 0.72
GNE-204ENST00000539208 SFNP31947 248 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 HSP90B2PQ58FF3 399 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 INTS8Q75QN2 995 aaKnown RBP19.52■□□□□ 0.72
GNE-204ENST00000539208 LRRC57Q8N9N7 239 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 INTS2Q9H0H0 1204 aaKnown RBP19.52■□□□□ 0.72
GNE-204ENST00000539208 PXMP2Q9NR77 195 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 HOMER2Q9NSB8 354 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 STIM2Q9P246 746 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 DMGDHQ9UI17 866 aaKnown RBP19.52■□□□□ 0.72
GNE-204ENST00000539208 DNAJC12Q9UKB3 198 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 ADAM21Q9UKJ8 722 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 HPCAL4Q9UM19 191 aa19.52■□□□□ 0.72
GNE-204ENST00000539208 BRCA1P38398 1863 aaKnown RBP19.52■□□□□ 0.71
GNE-204ENST00000539208 VWA5AO00534 786 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 MAPK13O15264 365 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 EVI5O60447 810 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 H2AFZP0C0S5 128 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 CCDC172P0C7W6 258 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 YWHABP31946 246 aaKnown RBP19.51■□□□□ 0.71
GNE-204ENST00000539208 NPEPPSP55786 919 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 MCCD1P59942 119 aaPredicted RBP19.51■□□□□ 0.71
GNE-204ENST00000539208 GTF2BQ00403 316 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 DGKZQ13574 1117 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 RNF207Q6ZRF8 634 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 H2AFVQ71UI9 128 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 SLC17A8Q8NDX2 589 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 LMBR1Q8WVP7 490 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 INPP4AQ96PE3 977 aaPredicted RBP19.51■□□□□ 0.71
GNE-204ENST00000539208 RMDN3Q96TC7 470 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 RBM12Q9NTZ6 932 aaKnown RBP19.51■□□□□ 0.71
GNE-204ENST00000539208 ANKEF1Q9NU02 776 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 SMARCAL1Q9NZC9 954 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 EHD2Q9NZN4 543 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 APEX2Q9UBZ4 518 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 ZNF112Q9UJU3 913 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 ASTN2O75129 1339 aaPredicted RBP19.51■□□□□ 0.71
GNE-204ENST00000539208 P4HA2O15460 535 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 KRT13P13646 458 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 LMNB1P20700 586 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 TNNT3P45378 269 aaPredicted RBP19.51■□□□□ 0.71
GNE-204ENST00000539208 PSMC5P62195 406 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 MYL7Q01449 175 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 KRT76Q01546 638 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 SPP2Q13103 211 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 DRAP1Q14919 205 aaPredicted RBP19.51■□□□□ 0.71
GNE-204ENST00000539208 DCAF15Q66K64 600 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 RDM1Q8NG50 284 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 OLIG1Q8TAK6 271 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 HDAC7Q8WUI4 952 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 MS4A14Q96JA4 679 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 IWS1Q96ST2 819 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 SYT11Q9BT88 431 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 SELENOOQ9BVL4 669 aa19.51■□□□□ 0.71
GNE-204ENST00000539208 HACL1Q9UJ83 578 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms