RNA–Protein interactions for RNA: ENST00000530304.5

PCF11-203, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 1 (best)

Gene PCF11, Length 2,649 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-203ENST00000530304 BTNL9Q6UXG8 535 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 SPICE1Q8N0Z3 855 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 CCDC26Q8TAB7 109 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 PRR12Q9ULL5 1215 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 NRXN2Q9P2S2 1712 aa21.17■□□□□ 0.98
PCF11-203ENST00000530304 TTI1O43156 1089 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 BUB1BO60566 1050 aaPredicted RBP21.16■□□□□ 0.98
PCF11-203ENST00000530304 GH2P01242 217 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 LMNB1P20700 586 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 HPDP32754 393 aaPredicted RBP21.16■□□□□ 0.98
PCF11-203ENST00000530304 SMCHD1A6NHR9 2005 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 ZNF844Q08AG5 666 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 CBWD6Q4V339 395 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 CBWD3Q5JTY5 395 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 CBWD5Q5RIA9 395 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 LRCH2Q5VUJ6 765 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 NAA35Q5VZE5 725 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 FIZ1Q96SL8 496 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 MKNK1Q9BUB5 465 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 CELF4Q9BZC1 486 aaKnown RBP21.16■□□□□ 0.98
PCF11-203ENST00000530304 GPR88Q9GZN0 384 aa21.16■□□□□ 0.98
PCF11-203ENST00000530304 A0A1W2PRG0 241 aa21.15■□□□□ 0.98
PCF11-203ENST00000530304 INPP5BP32019 993 aa21.15■□□□□ 0.98
PCF11-203ENST00000530304 SEC24CP53992 1094 aa21.15■□□□□ 0.98
PCF11-203ENST00000530304 ZNF720Q7Z2F6 126 aa21.15■□□□□ 0.98
PCF11-203ENST00000530304 UBLCP1Q8WVY7 318 aaPredicted RBP21.15■□□□□ 0.98
PCF11-203ENST00000530304 PPP1R9AQ9ULJ8 1098 aa21.15■□□□□ 0.98
PCF11-203ENST00000530304 PSMD10O75832 226 aa21.15■□□□□ 0.98
PCF11-203ENST00000530304 ABCB4P21439 1286 aa21.15■□□□□ 0.98
PCF11-203ENST00000530304 ONECUT3O60422 494 aaPredicted RBP21.14■□□□□ 0.98
PCF11-203ENST00000530304 CFBP00751 764 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 FGGP02679 453 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 TMEM253P0C7T8 217 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 RBM26Q5T8P6 1007 aaKnown RBP21.14■□□□□ 0.98
PCF11-203ENST00000530304 STRIP1Q5VSL9 837 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 ZNF473Q8WTR7 871 aaKnown RBP21.14■□□□□ 0.98
PCF11-203ENST00000530304 RFFLQ8WZ73 363 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 SEC14L1Q92503 715 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 CCT8L2Q96SF2 557 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 SYT11Q9BT88 431 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 FRMD4BQ9Y2L6 1034 aa21.14■□□□□ 0.98
PCF11-203ENST00000530304 IGSF9BQ9UPX0 1349 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 CYP2J2P51589 502 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 PPATQ06203 517 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 PPP2R5CQ13362 524 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 DACT2Q5SW24 774 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 NLRP14Q86W24 1093 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 SPATS2Q86XZ4 545 aaKnown RBP21.14■□□□□ 0.97
PCF11-203ENST00000530304 FAM178BQ8IXR5 827 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 CTNNBL1Q8WYA6 563 aaPredicted RBP21.14■□□□□ 0.97
PCF11-203ENST00000530304 TTC7AQ9ULT0 858 aaPredicted RBP21.14■□□□□ 0.97
PCF11-203ENST00000530304 UTP11Q9Y3A2 253 aaKnown RBP21.14■□□□□ 0.97
PCF11-203ENST00000530304 NCANO14594 1321 aa21.14■□□□□ 0.97
PCF11-203ENST00000530304 ATXN2Q99700 1313 aaKnown RBP21.14■□□□□ 0.97
PCF11-203ENST00000530304 MYO1FO00160 1098 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 NPM3O75607 178 aaKnown RBP21.13■□□□□ 0.97
PCF11-203ENST00000530304 TRIM49P0CI25 452 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 TRIM49CP0CI26 452 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 HDLBPQ00341 1268 aaKnown RBP21.13■□□□□ 0.97
PCF11-203ENST00000530304 RRP1BQ14684 758 aaKnown RBP21.13■□□□□ 0.97
PCF11-203ENST00000530304 HS2ST1Q7LGA3 356 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 ARFGAP2Q8N6H7 521 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 MYCBPAPQ8TBZ2 947 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 AGPAT3Q9NRZ7 376 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 NR2E1Q9Y466 385 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 FAM170AA1A519 330 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 DDX3YO15523 660 aaKnown RBP21.13■□□□□ 0.97
PCF11-203ENST00000530304 POU5F1Q01860 360 aaKnown RBP21.13■□□□□ 0.97
PCF11-203ENST00000530304 MTMR3Q13615 1198 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 DCAF12L1Q5VU92 463 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 RUFY4Q6ZNE9 571 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 KAT2BQ92831 832 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 DMAC2Q9NW81 257 aa21.13■□□□□ 0.97
PCF11-203ENST00000530304 TMC3Q7Z5M5 1100 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 SLC5A5Q92911 643 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 PAGR1Q9BTK6 254 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 INTS2Q9H0H0 1204 aaKnown RBP21.12■□□□□ 0.97
PCF11-203ENST00000530304 DPH5Q9H2P9 285 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 WRAP73Q9P2S5 460 aaPredicted RBP21.12■□□□□ 0.97
PCF11-203ENST00000530304 SEL1LQ9UBV2 794 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 APEX2Q9UBZ4 518 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 FRMPD4Q14CM0 1322 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 UBAP1LF5GYI3 381 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 MEFVO15553 781 aaPredicted RBP21.12■□□□□ 0.97
PCF11-203ENST00000530304 ZNF131P52739 623 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 UBXN2AP68543 259 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 BIRC3Q13489 604 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 PLS1Q14651 629 aa21.12■□□□□ 0.97
PCF11-203ENST00000530304 TDRD3Q9H7E2 651 aaKnown RBP21.12■□□□□ 0.97
PCF11-203ENST00000530304 BCCIPQ9P287 314 aaKnown RBP eCLIP21.12■□□□□ 0.97
PCF11-203ENST00000530304 E7EVH7 732 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 KIAA0754O94854 1291 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 FAM107AO95990 144 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 PRELPP51888 382 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 STAT2P52630 851 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 PPARDQ03181 441 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 ODR4Q5SWX8 454 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 ARHGEF26Q96DR7 871 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 THAP2Q9H0W7 228 aa21.11■□□□□ 0.97
PCF11-203ENST00000530304 PPANQ9NQ55 473 aaKnown RBP21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms