RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 C15orf39Q6ZRI6 1047 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 TMEM173Q86WV6 379 aaPredicted RBP18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 KIAA2013Q8IYS2 634 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 CNTNAP3BQ96NU0 1288 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 MTA3Q9BTC8 594 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 CNTNAP3Q9BZ76 1288 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 ADAMTS10Q9H324 1103 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 LY9Q9HBG7 655 aa18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 SEC63Q9UGP8 760 aaKnown RBP18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 U3KPZ7 1027 aaPredicted RBP18.52■□□□□ 0.56
CHMP4A-203ENST00000527154 EVPLQ92817 2033 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 CARNS1A5YM72 827 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 N4BP1O75113 896 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 PLEKHA8P1O95397 391 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 CCDC149Q6ZUS6 474 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 DDX53Q86TM3 631 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 MB21D2Q8IYB1 491 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 ZNF654Q8IZM8 581 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 VPS52Q8N1B4 723 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 ZNF710Q8N1W2 664 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 CTCFLQ8NI51 663 aaPredicted RBP18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 RUBCNQ92622 972 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 TRAIPQ9BWF2 469 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 MRPL9Q9BYD2 267 aaKnown RBP18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 SFXN1Q9H9B4 322 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 R4GN57 208 aa18.51■□□□□ 0.55
CHMP4A-203ENST00000527154 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 DHX15O43143 795 aaKnown RBP18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 GNAQP50148 359 aa18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 BMS1Q14692 1282 aaKnown RBP18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 PHLDB3Q6NSJ2 640 aa18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 TMC5Q6UXY8 1006 aa18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 ABI1Q8IZP0 508 aa18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 SUMF1Q8NBK3 374 aa18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 NCOA7Q8NI08 942 aa18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 TMEM169Q96HH4 297 aa18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 MAFBQ9Y5Q3 323 aaPredicted RBP18.5■□□□□ 0.55
CHMP4A-203ENST00000527154 CFAP47Q6ZTR5 3102 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 E7EWF7 191 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 NARSO43776 548 aaKnown RBP18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 LILRB3O75022 631 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 VTNP04004 478 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 EIF4BP23588 611 aaKnown RBP18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 ALDH7A1P49419 539 aaKnown RBP18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 FAM160B1Q5W0V3 765 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 NIPA1Q7RTP0 329 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 CABP7Q86V35 215 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 PPFIBP1Q86W92 1011 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 CMASQ8NFW8 434 aaPredicted RBP18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 BBXQ8WY36 941 aaPredicted RBP18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 IGSF21Q96ID5 467 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 VN1R3Q9BXE9 311 aa18.49■□□□□ 0.55
CHMP4A-203ENST00000527154 NT5C1B-RDH14C9J2C7 533 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 METAP2P50579 478 aaKnown RBP eCLIP18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 TBC1D8BQ0IIM8 1120 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 PTPN14Q15678 1187 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 LETM2Q2VYF4 491 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 ZC3H14Q6PJT7 736 aaKnown RBP18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 HELQQ8TDG4 1101 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 KCNG4Q8TDN1 519 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 BCL7CQ8WUZ0 217 aaPredicted RBP18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 AUTS2Q8WXX7 1259 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 MYL10Q9BUA6 226 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 ZNF302Q9NR11 478 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 EPS15L1Q9UBC2 864 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 FBXL21Q9UKT6 434 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 C2orf16Q68DN1 1984 aa18.48■□□□□ 0.55
CHMP4A-203ENST00000527154 SPTBN2O15020 2390 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 SP9P0CG40 484 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 ZSCAN20P17040 1043 aaPredicted RBP18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 SREBF1P36956 1147 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 CLCN4P51793 760 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 PDXDC2PQ6P474 469 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 RALYLQ86SE5 291 aaKnown RBP18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 CHD1LQ86WJ1 897 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 CRYGNQ8WXF5 182 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 NXPE3Q969Y0 559 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 BORCS6Q96GS4 357 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 PPP1R16BQ96T49 567 aa18.47■□□□□ 0.55
CHMP4A-203ENST00000527154 MAGEB2O15479 319 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 FOSP01100 380 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 GALTP07902 379 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 DARSP14868 501 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 NLRP11P59045 1033 aaKnown RBP18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 NUCB1Q02818 461 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 PTH1RQ03431 593 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 TYW1BQ6NUM6 668 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 CYP26C1Q6V0L0 522 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 MAML2Q8IZL2 1156 aaPredicted RBP18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 TBC1D17Q9HA65 648 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 CACNA1IQ9P0X4 2223 aa18.46■□□□□ 0.55
CHMP4A-203ENST00000527154 IGLV3-22A0A075B6J6 115 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 BACH1O14867 736 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 SRFP11831 508 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 CLK2P49760 499 aaKnown RBP18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 CLCN3P51790 818 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 SWSAP1Q6NVH7 229 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 C1orf210Q8IVY1 113 aa18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 CMTR1Q8N1G2 835 aaKnown RBP18.45■□□□□ 0.54
CHMP4A-203ENST00000527154 SLC44A3Q8N4M1 653 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms