RNA–Protein interactions for RNA: ENST00000522165.5

COL13A1-214, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-214ENST00000522165 GPRC5CQ9NQ84 441 aa28.32■■■□□ 2.12
COL13A1-214ENST00000522165 PFASO15067 1338 aa28.32■■■□□ 2.12
COL13A1-214ENST00000522165 ZNF862O60290 1169 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 UCHL3P15374 230 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 GTF2BQ00403 316 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 CNTN2Q02246 1040 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 RAPGEF1Q13905 1077 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 STXBP2Q15833 593 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 TDRD12Q587J7 1177 aaKnown RBP28.31■■■□□ 2.12
COL13A1-214ENST00000522165 USP50Q70EL3 339 aaPredicted RBP28.31■■■□□ 2.12
COL13A1-214ENST00000522165 ANKRD13AQ8IZ07 590 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 DUSP10Q9Y6W6 482 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 DKC1O60832 514 aaKnown RBP eCLIP28.31■■■□□ 2.12
COL13A1-214ENST00000522165 STBD1O95210 358 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 DPY19L2Q6NUT2 758 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 OTUD6AQ7L8S5 288 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 HAUS6Q7Z4H7 955 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 TMEM174Q8WUU8 243 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 TELO2Q9Y4R8 837 aa28.31■■■□□ 2.12
COL13A1-214ENST00000522165 CXCL11O14625 94 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 NF2P35240 595 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 NCKAP1LP55160 1127 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 ACTR2P61160 394 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 FAM102BQ5T8I3 360 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 SIX2Q9NPC8 291 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 FBXL5Q9UKA1 691 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 DOCK5Q9H7D0 1870 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 SPDYE5A6NIY4 337 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 RBAK-RBAKDNI3L0D1 243 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 EIF3JO75822 258 aaKnown RBP28.3■■■□□ 2.12
COL13A1-214ENST00000522165 PEX3P56589 373 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 AMPD2Q01433 879 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 PPP2R5AQ15172 486 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 SWSAP1Q6NVH7 229 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 ABHD15Q6UXT9 468 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 MOB2Q70IA6 237 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 ZC3H15Q8WU90 426 aaKnown RBP28.3■■■□□ 2.12
COL13A1-214ENST00000522165 SPATC1LQ9H0A9 340 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 GCNT4Q9P109 453 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 FHOD1Q9Y613 1164 aa28.3■■■□□ 2.12
COL13A1-214ENST00000522165 EXOC3O60645 756 aa28.29■■■□□ 2.12
COL13A1-214ENST00000522165 ICAM3P32942 547 aa28.29■■■□□ 2.12
COL13A1-214ENST00000522165 GFPT1Q06210 699 aaPredicted RBP28.29■■■□□ 2.12
COL13A1-214ENST00000522165 RSRC2Q7L4I2 434 aaKnown RBP28.29■■■□□ 2.12
COL13A1-214ENST00000522165 C12orf56Q8IXR9 622 aa28.29■■■□□ 2.12
COL13A1-214ENST00000522165 SLC17A8Q8NDX2 589 aa28.29■■■□□ 2.12
COL13A1-214ENST00000522165 IRX3P78415 501 aaPredicted RBP28.28■■■□□ 2.12
COL13A1-214ENST00000522165 FSTL1Q12841 308 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 ASIC2Q16515 512 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 FAM133AQ8N9E0 248 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 MYO6Q9UM54 1294 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 SLC16A4O15374 487 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 EPHX2P34913 555 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 MAGEA1P43355 309 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 FMO5P49326 533 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 ALDH5A1P51649 535 aaPredicted RBP28.28■■■□□ 2.12
COL13A1-214ENST00000522165 SP2Q02086 613 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 SP4Q02446 784 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 SRGAP1Q7Z6B7 1085 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 CCDC60Q8IWA6 550 aaPredicted RBP28.28■■■□□ 2.12
COL13A1-214ENST00000522165 SECISBP2LQ93073 1101 aaKnown RBP28.28■■■□□ 2.12
COL13A1-214ENST00000522165 CEP170P1Q96L14 293 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 KCNH4Q9UQ05 1017 aa28.28■■■□□ 2.12
COL13A1-214ENST00000522165 MACROD2A1Z1Q3 448 aa28.27■■■□□ 2.12
COL13A1-214ENST00000522165 FBXO38Q6PIJ6 1188 aa28.27■■■□□ 2.12
COL13A1-214ENST00000522165 CEP112Q8N8E3 955 aa28.27■■■□□ 2.12
COL13A1-214ENST00000522165 ASCC2Q9H1I8 757 aaPredicted RBP28.27■■■□□ 2.12
COL13A1-214ENST00000522165 PJA2O43164 708 aa28.27■■■□□ 2.12
COL13A1-214ENST00000522165 KLHL30Q0D2K2 578 aa28.27■■■□□ 2.12
COL13A1-214ENST00000522165 MIS18BP1Q6P0N0 1132 aa28.27■■■□□ 2.12
COL13A1-214ENST00000522165 SPAG5Q96R06 1193 aa28.27■■■□□ 2.12
COL13A1-214ENST00000522165 TISP43B9A030 160 aa28.26■■■□□ 2.11
COL13A1-214ENST00000522165 SNRPFP62306 86 aaKnown RBP28.26■■■□□ 2.11
COL13A1-214ENST00000522165 ARID5AQ03989 594 aa28.26■■■□□ 2.11
COL13A1-214ENST00000522165 BFSP1Q12934 665 aa28.26■■■□□ 2.11
COL13A1-214ENST00000522165 TTLL12Q14166 644 aaPredicted RBP28.26■■■□□ 2.11
COL13A1-214ENST00000522165 WHAMMP3Q1A5X7 153 aa28.26■■■□□ 2.11
COL13A1-214ENST00000522165 NCAPG2Q86XI2 1143 aa28.26■■■□□ 2.11
COL13A1-214ENST00000522165 SORBS3O60504 671 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 SUPT20HL2P0C7V6 817 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 PRKCEQ02156 737 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 PPIL2Q13356 520 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 TRAPPC11Q7Z392 1133 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 IRF2BP2Q7Z5L9 587 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 KIFAP3Q92845 792 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 AGTPBP1Q9UPW5 1226 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 ARID2Q68CP9 1835 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 CNMDO75829 334 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 H2AFXP16104 143 aaPredicted RBP28.25■■■□□ 2.11
COL13A1-214ENST00000522165 NPTX2P47972 431 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 SMTNP53814 917 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 TXLNBQ8N3L3 684 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 TMEM161BQ8NDZ6 487 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 GOLGA1Q92805 767 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 CBWD1Q9BRT8 395 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 PAGR1Q9BTK6 254 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 PCIF1Q9H4Z3 704 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 PDLIM7Q9NR12 457 aa28.25■■■□□ 2.11
COL13A1-214ENST00000522165 POTEB2H3BUK9 544 aa28.24■■■□□ 2.11
COL13A1-214ENST00000522165 ENC1O14682 589 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms