RNA–Protein interactions for RNA: ENST00000509088.5

LINC01088-205, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best) BASIC

Gene LINC01088, Length 756 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-205ENST00000509088 ALDH6A1Q02252 535 aaKnown RBP6.66□□□□□ -1.34
LINC01088-205ENST00000509088 RRP1BQ14684 758 aaKnown RBP6.66□□□□□ -1.34
LINC01088-205ENST00000509088 FGD2Q7Z6J4 655 aa6.66□□□□□ -1.34
LINC01088-205ENST00000509088 SGMS1Q86VZ5 419 aa6.66□□□□□ -1.34
LINC01088-205ENST00000509088 IPO9Q96P70 1041 aaKnown RBP6.66□□□□□ -1.34
LINC01088-205ENST00000509088 AURKAIP1Q9NWT8 199 aaPredicted RBP6.66□□□□□ -1.34
LINC01088-205ENST00000509088 GIT1Q9Y2X7 761 aa6.66□□□□□ -1.34
LINC01088-205ENST00000509088 A0A087X1B8 175 aa6.65□□□□□ -1.34
LINC01088-205ENST00000509088 APEX1P27695 318 aaKnown RBP6.65□□□□□ -1.34
LINC01088-205ENST00000509088 ADCY7P51828 1080 aa6.65□□□□□ -1.34
LINC01088-205ENST00000509088 JMYQ8N9B5 988 aa6.65□□□□□ -1.34
LINC01088-205ENST00000509088 RABGGTAQ92696 567 aa6.65□□□□□ -1.34
LINC01088-205ENST00000509088 SHROOM4Q9ULL8 1493 aa6.65□□□□□ -1.35
LINC01088-205ENST00000509088 TCRBV16S1A1N1A0A5B0 115 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 SLC12A8A0AV02 714 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 KCNQ2O43526 872 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 EFCAB14O75071 495 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 ATP2C1P98194 919 aaPredicted RBP6.64□□□□□ -1.35
LINC01088-205ENST00000509088 SQSTM1Q13501 440 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 TMEM132BQ14DG7 1078 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 Q6ZRM9 215 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 OTOP1Q7RTM1 612 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 BRAPQ7Z569 592 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 SH3TC2Q8TF17 1288 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 GPHA2Q96T91 129 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 AGAP2Q99490 1192 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 SLC2A4RGQ9NR83 387 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 MAGEL2Q9UJ55 1249 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 VWA7Q9Y334 891 aa6.64□□□□□ -1.35
LINC01088-205ENST00000509088 C2orf78A6NCI8 922 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 DVL2O14641 736 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 SCNN1GP51170 649 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 ANTXR2P58335 489 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 HHEXQ03014 270 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 COL10A1Q03692 680 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 TMEM177Q53S58 311 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 ZNF575Q86XF7 245 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 WDR48Q8TAF3 677 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 CLIP3Q96DZ5 547 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 MPHOSPH9Q99550 1183 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 FOXB1Q99853 325 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 TRIM39Q9HCM9 518 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 GPRC5BQ9NZH0 403 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 CADPSQ9ULU8 1353 aa6.63□□□□□ -1.35
LINC01088-205ENST00000509088 ADH4P08319 380 aa6.62□□□□□ -1.35
LINC01088-205ENST00000509088 MAKP20794 623 aa6.62□□□□□ -1.35
LINC01088-205ENST00000509088 MECP2P51608 486 aaKnown RBP6.62□□□□□ -1.35
LINC01088-205ENST00000509088 IRF9Q00978 393 aa6.62□□□□□ -1.35
LINC01088-205ENST00000509088 ZC3H12BQ5HYM0 836 aaKnown RBP6.62□□□□□ -1.35
LINC01088-205ENST00000509088 THEMISQ8N1K5 641 aaPredicted RBP6.62□□□□□ -1.35
LINC01088-205ENST00000509088 IGSF22Q8N9C0 903 aa6.62□□□□□ -1.35
LINC01088-205ENST00000509088 CALML6Q8TD86 181 aa6.62□□□□□ -1.35
LINC01088-205ENST00000509088 NKD2Q969F2 451 aaPredicted RBP6.62□□□□□ -1.35
LINC01088-205ENST00000509088 MAGEB10Q96LZ2 347 aaPredicted RBP6.62□□□□□ -1.35
LINC01088-205ENST00000509088 SFMBT1Q9UHJ3 866 aa6.62□□□□□ -1.35
LINC01088-205ENST00000509088 PRLP01236 227 aa6.61□□□□□ -1.35
LINC01088-205ENST00000509088 NANOS3P60323 173 aaKnown RBP6.61□□□□□ -1.35
LINC01088-205ENST00000509088 C2orf27AQ580R0 203 aa6.61□□□□□ -1.35
LINC01088-205ENST00000509088 SDE2Q6IQ49 451 aa6.61□□□□□ -1.35
LINC01088-205ENST00000509088 CC2D1AQ6P1N0 951 aaPredicted RBP6.61□□□□□ -1.35
LINC01088-205ENST00000509088 KLHDC10Q6PID8 442 aa6.61□□□□□ -1.35
LINC01088-205ENST00000509088 THAP3Q8WTV1 239 aaPredicted RBP6.61□□□□□ -1.35
LINC01088-205ENST00000509088 ERCC4Q92889 916 aaPredicted RBP6.61□□□□□ -1.35
LINC01088-205ENST00000509088 SLC6A15Q9H2J7 730 aa6.61□□□□□ -1.35
LINC01088-205ENST00000509088 TMA7Q9Y2S6 64 aaKnown RBP6.61□□□□□ -1.35
LINC01088-205ENST00000509088 DMRT1Q9Y5R6 373 aa6.61□□□□□ -1.35
LINC01088-205ENST00000509088 PTCH2Q9Y6C5 1203 aa6.61□□□□□ -1.35
LINC01088-205ENST00000509088 A0A1W2PRX2 142 aa6.6□□□□□ -1.35
LINC01088-205ENST00000509088 CYP27B1O15528 508 aa6.6□□□□□ -1.35
LINC01088-205ENST00000509088 RGS3P49796 1198 aa6.6□□□□□ -1.35
LINC01088-205ENST00000509088 TOB2Q14106 344 aaPredicted RBP6.6□□□□□ -1.35
LINC01088-205ENST00000509088 ULK2Q8IYT8 1036 aa6.6□□□□□ -1.35
LINC01088-205ENST00000509088 OR5AN1Q8NGI8 311 aa6.6□□□□□ -1.35
LINC01088-205ENST00000509088 LPPQ93052 612 aa6.6□□□□□ -1.35
LINC01088-205ENST00000509088 SLC7A6OSQ96CW6 309 aaPredicted RBP6.6□□□□□ -1.35
LINC01088-205ENST00000509088 PARPBPQ9NWS1 579 aa6.6□□□□□ -1.35
LINC01088-205ENST00000509088 PEX11BO96011 259 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 MAP3K12Q12852 859 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 CRHR2Q13324 411 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 MRGPRGQ86SM5 289 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 FAM177A1Q8N128 213 aaPredicted RBP6.59□□□□□ -1.35
LINC01088-205ENST00000509088 C2orf69Q8N8R5 385 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 BOCQ9BWV1 1114 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 MRPL4Q9BYD3 311 aaKnown RBP6.59□□□□□ -1.35
LINC01088-205ENST00000509088 TMEM260Q9NX78 707 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 DENND2AQ9ULE3 1009 aa6.59□□□□□ -1.35
LINC01088-205ENST00000509088 NPTXRO95502 500 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 FNTBP49356 437 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 C1QL3Q5VWW1 255 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 GAREM2Q75VX8 874 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 ANKRD35Q8N283 1001 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 ANKRD53Q8N9V6 530 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 RPL10LQ96L21 214 aaKnown RBP6.58□□□□□ -1.36
LINC01088-205ENST00000509088 HAPLN2Q9GZV7 340 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 FANCLQ9NW38 375 aa6.58□□□□□ -1.36
LINC01088-205ENST00000509088 SAE1Q9UBE0 346 aaPredicted RBP6.58□□□□□ -1.36
LINC01088-205ENST00000509088 RBM8AQ9Y5S9 174 aaKnown RBP6.58□□□□□ -1.36
LINC01088-205ENST00000509088 KLRG2A4D1S0 409 aaPredicted RBP6.57□□□□□ -1.36
LINC01088-205ENST00000509088 HIP1RO75146 1068 aa6.57□□□□□ -1.36
LINC01088-205ENST00000509088 RABGGTBP53611 331 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms