RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 E2F7Q96AV8 911 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 AGO3Q9H9G7 860 aaKnown RBP4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 IFT57Q9NWB7 429 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 DNAI1Q9UI46 699 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 TSC22D4Q9Y3Q8 395 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 TCAF1Q9Y4C2 921 aa4.98□□□□□ -1.61
HMGB1P29-201ENST00000505659 A0A087X0B3 334 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 C2orf78A6NCI8 922 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 GSG1L2A8MUP6 293 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 C1QTNF3-AMACRE9PGA6 284 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 ENPP3O14638 875 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 SMAD3P84022 425 aaKnown RBP4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 ATP2C1P98194 919 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 KIF18BQ86Y91 864 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 EFHBQ8N7U6 833 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 C7orf31Q8N865 590 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 SMC1BQ8NDV3 1235 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 NKD2Q969F2 451 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 TMEM176AQ96HP8 235 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 MTG2Q9H4K7 406 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 SPTLC3Q9NUV7 552 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 SAE1Q9UBE0 346 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 DENND2AQ9ULE3 1009 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 PLAAQ9Y263 795 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 MYRFQ9Y2G1 1151 aa4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 CTDP1Q9Y5B0 961 aaPredicted RBP4.97□□□□□ -1.61
HMGB1P29-201ENST00000505659 ELL2O00472 640 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 MUSKO15146 869 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 PRPF6O94906 941 aaKnown RBP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 MYCLP1P12525 358 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 HNRNPLP14866 589 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 ADCYAP1R1P41586 468 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 ADCY2Q08462 1091 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 DGKDQ16760 1214 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 ZBTB41Q5SVQ8 909 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 KLHDC10Q6PID8 442 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 Q6ZSN1 163 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 KANSL1Q7Z3B3 1105 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 NOP9Q86U38 636 aaKnown RBP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 PPM1KQ8N3J5 372 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 LEO1Q8WVC0 666 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 DYDC2Q96IM9 177 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 ADOQ96SZ5 270 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 POLR3BQ9NW08 1133 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 KCMF1Q9P0J7 381 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 RBM8AQ9Y5S9 174 aaKnown RBP4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 SLC30A1Q9Y6M5 507 aa4.96□□□□□ -1.62
HMGB1P29-201ENST00000505659 SLC26A4O43511 780 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 PDE8AO60658 829 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 ACO1P21399 889 aaKnown RBP4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 COMTP21964 271 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 MSX2P35548 267 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 KPNA1P52294 538 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 FOXL1Q12952 345 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 RIN1Q13671 783 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 NME9Q86XW9 330 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 PHYKPLQ8IUZ5 450 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 ZNF808Q8N4W9 903 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 SHCBP1Q8NEM2 672 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 ZNF496Q96IT1 587 aaPredicted RBP4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 RPL10LQ96L21 214 aaKnown RBP4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 HAPLN2Q9GZV7 340 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 MSRAQ9UJ68 235 aa4.95□□□□□ -1.62
HMGB1P29-201ENST00000505659 A0A0A6YYK5 440 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 OPHN1O60890 802 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 SCNN1BP51168 640 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 ADCY7P51828 1080 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 GYS2P54840 703 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 IL2P60568 153 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 ADAM8P78325 824 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 ADCY1Q08828 1119 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 TCIRG1Q13488 830 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 PLEKHG4Q58EX7 1191 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 KIAA1841Q6NSI8 718 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 POLNQ7Z5Q5 900 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 BMP8AQ7Z5Y6 402 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 UBR7Q8N806 425 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 RPGRQ92834 1020 aaKnown RBP4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 BORCS6Q96GS4 357 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 WDR92Q96MX6 357 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 GPHA2Q96T91 129 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 SOX7Q9BT81 388 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 PITHD1Q9GZP4 211 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 PLA2G3Q9NZ20 509 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 VWA7Q9Y334 891 aa4.94□□□□□ -1.62
HMGB1P29-201ENST00000505659 A0A0A6YYJ9 748 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 H2AFYO75367 372 aaKnown RBP4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 PCDH8O95206 1070 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 FKBP9O95302 570 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 CD40P25942 277 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 ID4P47928 161 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 LSSP48449 732 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 BCAR1P56945 870 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 BPIFB4P59827 614 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 LRRC32Q14392 662 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 GRM7Q14831 915 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 HS1BP3Q53T59 392 aa4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 TIGD7Q6NT04 549 aaPredicted RBP4.93□□□□□ -1.62
HMGB1P29-201ENST00000505659 FKBP9P1Q75LS8 142 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms