RNA–Protein interactions for RNA: ENST00000503427.5

HMGXB3-202, Transcript of HMG-box containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HMGXB3, Length 5,275 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-202ENST00000503427 MYO1EQ12965 1108 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 COASYQ13057 564 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 NUGGCQ68CJ6 796 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 GDAP1Q8TB36 358 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 IGDCC4Q8TDY8 1250 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 FAM149B1Q96BN6 582 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 MRPS25P82663 173 aaKnown RBP17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 SFR1Q86XK3 245 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 ABI1Q8IZP0 508 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 LRGUKQ96M69 825 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 SNX25Q9H3E2 840 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 MTMR4Q9NYA4 1195 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 TMEM260Q9NX78 707 aa17.34■□□□□ 0.37
HMGXB3-202ENST00000503427 ACSL3O95573 720 aa17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 OATP04181 439 aa17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 NAA30Q147X3 362 aaPredicted RBP17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 PADI6Q6TGC4 694 aa17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 TADA2BQ86TJ2 420 aa17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 MSTO1Q9BUK6 570 aa17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 NXF1Q9UBU9 619 aaKnown RBP17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 SNX24Q9Y343 169 aa17.33■□□□□ 0.37
HMGXB3-202ENST00000503427 P4HBP07237 508 aaKnown RBP17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 COPB2P35606 906 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 BBS9Q3SYG4 887 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 JADE1Q6IE81 842 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 SRBD1Q8N5C6 995 aaKnown RBP17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 PYROXD1Q8WU10 500 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 IQANK1A0A1B0GTG1 560 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 MAPK13O15264 365 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 ZSCAN20P17040 1043 aaPredicted RBP17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 MUM1L1Q5H9M0 696 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 METTL23Q86XA0 190 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 DEPDC5O75140 1603 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 PRPSAP2O60256 369 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 MMEP08473 750 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 GPC5P78333 572 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 HDAC11Q96DB2 347 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 RPF1Q9H9Y2 349 aaKnown RBP17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 EPS15L1Q9UBC2 864 aa17.33■□□□□ 0.36
HMGXB3-202ENST00000503427 GOLGA8IPA6NC78 632 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 GOLGA8JA6NMD2 632 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 SFI1A8K8P3 1242 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 CHRNA5P30532 468 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 PEX19P40855 299 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 IQCB1Q15051 598 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 CCNYQ8ND76 341 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 EDEM3Q9BZQ6 932 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 SLC38A10Q9HBR0 1119 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 GOLGA8CPA6NN73 597 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 TTC4O95801 387 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 CLGNO14967 610 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 TJP3O95049 919 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 KCNB1Q14721 858 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 METTL16Q86W50 562 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 STAG2Q8N3U4 1231 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 THEGQ9P2T0 379 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 E9PMD0 336 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 QARSP47897 775 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 SATB1Q01826 763 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 KNOP1Q1ED39 458 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 ZBTB33Q86T24 672 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 SDCCAG3Q96C92 435 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 ELAC2Q9BQ52 826 aaKnown RBP17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 SMYD2Q9NRG4 433 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 PPLO60437 1756 aa17.32■□□□□ 0.36
HMGXB3-202ENST00000503427 SRGAP2CP0DJJ0 459 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 PLS3P13797 630 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 STX1BP61266 288 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 CAV1Q03135 178 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 OR6B2Q6IFH4 312 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 XXYLT1Q8NBI6 393 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 TRIM4Q9C037 500 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 ACAD9Q9H845 621 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 NYAP2Q9P242 653 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 CAPN11Q9UMQ6 739 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 TARSL2A2RTX5 802 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 SKIP12755 728 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 KPNA2P52292 529 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 COG7P83436 770 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 DNAAF3Q8N9W5 541 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 DDX27Q96GQ7 796 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 CNOT8Q9UFF9 292 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 FBXO2Q9UK22 296 aaPredicted RBP17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 FOXN1O15353 648 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 CD58P19256 250 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 ZNF543Q08ER8 600 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 TAF11Q15544 211 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 NFRKBQ6P4R8 1299 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 SMIM5Q71RC9 77 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 TRIM56Q9BRZ2 755 aaKnown RBP17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 HAUS8Q9BT25 410 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 PITPNM3Q9BZ71 974 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 POTEB3A0JP26 581 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 FRMD3A2A2Y4 597 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 POTECB2RU33 542 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 SMIM24O75264 130 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 SPARCL1Q14515 664 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 ANKRD20A4Q4UJ75 823 aa17.31■□□□□ 0.36
HMGXB3-202ENST00000503427 ANKRD20A8PQ5CZ79 823 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms