RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 SF3A1Q15459 793 aaKnown RBP24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 FAM117BQ6P1L5 589 aa24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 POTEGQ6S5H5 508 aa24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 SNX29Q8TEQ0 813 aa24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 TMEM143Q96AN5 459 aa24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 MTRQ99707 1265 aa24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 NKX2-4Q9H2Z4 354 aa24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 DBR1Q9UK59 544 aaKnown RBP24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 ST3GAL5Q9UNP4 418 aa24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 YBX2Q9Y2T7 364 aaKnown RBP24.5■■□□□ 1.51
UBE2D3-214ENST00000503282 MICAL3Q7RTP6 2002 aa24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 UPP2O95045 317 aa24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 PSPC1Q8WXF1 523 aaKnown RBP24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 TOP1MTQ969P6 601 aa24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 RAD9AQ99638 391 aa24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 GCOM2Q9BZD3 368 aaPredicted RBP24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 ZNF576Q9H609 170 aa24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 ERVK-5Q9HDB9 667 aa24.49■■□□□ 1.51
UBE2D3-214ENST00000503282 A0A087WZ62 844 aa24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 ZNF410Q86VK4 478 aa24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 FAM228AQ86W67 206 aa24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 PRPF31Q8WWY3 499 aaKnown RBP24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 FDXACB1Q9BRP7 624 aaPredicted RBP24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 TTYH1Q9H313 450 aaPredicted RBP24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 ATP6V0A4Q9HBG4 840 aa24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 MTMR10Q9NXD2 777 aa24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 KIAA1024Q9UPX6 916 aa24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 COL4A3BPQ9Y5P4 624 aa24.48■■□□□ 1.51
UBE2D3-214ENST00000503282 GBF1Q92538 1859 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 PP2D1A8MPX8 630 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 ASAP2O43150 1006 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 CA3P07451 260 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 DARSP14868 501 aaKnown RBP24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 CDC25AP30304 524 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 PPP2R2DQ66LE6 453 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 FAM173BQ6P4H8 233 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 RTN4RL1Q86UN2 441 aaPredicted RBP24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 KSR1Q8IVT5 923 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 NLRP4Q96MN2 994 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 INO80BQ9C086 356 aaPredicted RBP24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 INSL6Q9Y581 213 aa24.47■■□□□ 1.51
UBE2D3-214ENST00000503282 PTPRSQ13332 1948 aa24.46■■□□□ 1.51
UBE2D3-214ENST00000503282 DENND3A2RUS2 1198 aa24.46■■□□□ 1.51
UBE2D3-214ENST00000503282 ECM1Q16610 540 aa24.46■■□□□ 1.51
UBE2D3-214ENST00000503282 TSPYL2Q9H2G4 693 aaPredicted RBP24.46■■□□□ 1.51
UBE2D3-214ENST00000503282 TMX1Q9H3N1 280 aa24.46■■□□□ 1.51
UBE2D3-214ENST00000503282 DDX19AQ9NUU7 478 aaKnown RBP24.46■■□□□ 1.51
UBE2D3-214ENST00000503282 CLIC4Q9Y696 253 aa24.46■■□□□ 1.51
UBE2D3-214ENST00000503282 ARID2Q68CP9 1835 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 ARHGEF35A5YM69 484 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 USO1O60763 962 aaKnown RBP24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 SRGAP2CP0DJJ0 459 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 LAMTOR4Q0VGL1 99 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 MXD4Q14582 209 aaPredicted RBP24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 AK8Q96MA6 479 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 ADAM2Q99965 735 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 XPNPEP1Q9NQW7 623 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 DNM3Q9UQ16 869 aa24.45■■□□□ 1.5
UBE2D3-214ENST00000503282 ZSCAN20P17040 1043 aaPredicted RBP24.44■■□□□ 1.5
UBE2D3-214ENST00000503282 CEBPZQ03701 1054 aaKnown RBP24.44■■□□□ 1.5
UBE2D3-214ENST00000503282 ZRSR1Q15695 479 aaKnown RBP24.44■■□□□ 1.5
UBE2D3-214ENST00000503282 LINC01599Q8WXQ3 324 aa24.44■■□□□ 1.5
UBE2D3-214ENST00000503282 CSDE1O75534 798 aaKnown RBP24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 SFPQP23246 707 aaKnown RBP eCLIP24.43■■□□□ 1.53e-6■□□□□ 10.5
UBE2D3-214ENST00000503282 HTRA4P83105 476 aaPredicted RBP24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 BECN1Q14457 450 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 PADI6Q6TGC4 694 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 MAEAQ7L5Y9 396 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 MCPH1Q8NEM0 835 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 CDK5RAP3Q96JB5 506 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 YME1L1Q96TA2 773 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 MMTAG2Q9BU76 263 aaKnown RBP24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 BHMT2Q9H2M3 363 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 RGS18Q9NS28 235 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 C1orf112Q9NSG2 853 aa24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 RNF216Q9NWF9 866 aaPredicted RBP24.43■■□□□ 1.5
UBE2D3-214ENST00000503282 MGEA5O60502 916 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 STAG3L1P0CL83 205 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 FGFR4P22455 802 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 ARL2P36404 184 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 LONP1P36776 959 aaKnown RBP24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 TFDP1Q14186 410 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 GRIN2CQ14957 1233 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 FOXD4L5Q5VV16 416 aaPredicted RBP24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 SLC24A5Q71RS6 500 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 RNF149Q8NC42 400 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 FOXD4L4Q8WXT5 416 aaPredicted RBP24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 NT5C3AQ9H0P0 336 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 IFT122Q9HBG6 1241 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 LRFN2Q9ULH4 789 aa24.42■■□□□ 1.5
UBE2D3-214ENST00000503282 LCHNA4D1U4 455 aa24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 E9PMD0 336 aa24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 ZSCAN22P10073 491 aaPredicted RBP24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 IBSPP21815 317 aaPredicted RBP24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 UBA7P41226 1012 aa24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 PTPAQ15257 358 aa24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 SRGAP1Q7Z6B7 1085 aa24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 CABP7Q86V35 215 aa24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 KCTD17Q8N5Z5 321 aa24.41■■□□□ 1.5
UBE2D3-214ENST00000503282 ZNF396Q96N95 335 aaPredicted RBP24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms