RNA–Protein interactions for RNA: ENST00000494123.5

BRCA1-223, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-223ENST00000494123 GUCY2CP25092 1073 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 MRPS6P82932 125 aaKnown RBP16.15■□□□□ 0.18
BRCA1-223ENST00000494123 MKRN4PQ13434 485 aaPredicted RBP16.15■□□□□ 0.18
BRCA1-223ENST00000494123 TRIM71Q2Q1W2 868 aaKnown RBP16.15■□□□□ 0.18
BRCA1-223ENST00000494123 SH3RF1Q7Z6J0 888 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 RPAINQ86UA6 219 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 RHPN2Q8IUC4 686 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 FMR1NBQ8N0W7 255 aaPredicted RBP16.15■□□□□ 0.18
BRCA1-223ENST00000494123 STAMQ92783 540 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 KIFAP3Q92845 792 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 DRC1Q96MC2 740 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 PPP1R16BQ96T49 567 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 NOC4LQ9BVI4 516 aaKnown RBP16.15■□□□□ 0.18
BRCA1-223ENST00000494123 GPRC5CQ9NQ84 441 aa16.15■□□□□ 0.18
BRCA1-223ENST00000494123 NPHP3-ACAD11A0A0J9YXS1 232 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 KIAA0355O15063 1070 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 ACTN4O43707 911 aaKnown RBP16.14■□□□□ 0.17
BRCA1-223ENST00000494123 HIP1RO75146 1068 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 LIG1P18858 919 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 AFMP43652 599 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 CDC42EP1Q00587 391 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 MXD4Q14582 209 aaPredicted RBP16.14■□□□□ 0.17
BRCA1-223ENST00000494123 ARSHQ5FYA8 562 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 DYMQ7RTS9 669 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 PRPF31Q8WWY3 499 aaKnown RBP16.14■□□□□ 0.17
BRCA1-223ENST00000494123 LMBRD1Q9NUN5 540 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 KBTBD4Q9NVX7 518 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 GINS2Q9Y248 185 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 COL4A3BPQ9Y5P4 624 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 NR2E3Q9Y5X4 410 aa16.14■□□□□ 0.17
BRCA1-223ENST00000494123 TRIM43BA6NCK2 446 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 RSPH10B2B2RC85 870 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 ASAP2O43150 1006 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 KINO60870 393 aaKnown RBP16.13■□□□□ 0.17
BRCA1-223ENST00000494123 TBCAO75347 108 aaKnown RBP16.13■□□□□ 0.17
BRCA1-223ENST00000494123 RSPH10BP0C881 870 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 SELPP16109 830 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 NLRP11P59045 1033 aaKnown RBP16.13■□□□□ 0.17
BRCA1-223ENST00000494123 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
BRCA1-223ENST00000494123 RBL2Q08999 1139 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 LAMTOR4Q0VGL1 99 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 TFDP1Q14186 410 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 ZNF618Q5T7W0 954 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 KRBA2Q6ZNG9 492 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 LRRC8DQ7L1W4 858 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 ZNF710Q8N1W2 664 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 ENGASEQ8NFI3 743 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 NLRP7Q8WX94 980 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 DDX12PQ92771 950 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 TRIM43Q96BQ3 446 aaPredicted RBP16.13■□□□□ 0.17
BRCA1-223ENST00000494123 IFT74Q96LB3 600 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 NLRP4Q96MN2 994 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 REEP2Q9BRK0 252 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 POLD4Q9HCU8 107 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 ODF2LQ9ULJ1 636 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 TRPV2Q9Y5S1 764 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 CDY2AQ9Y6F7 541 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 MYH11P35749 1972 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 UMODL1Q5DID0 1318 aa16.13■□□□□ 0.17
BRCA1-223ENST00000494123 MYMKA6NI61 221 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 NR1I2O75469 434 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 FAM13AO94988 1023 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 TIMP1P01033 207 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 CYP2C18P33260 490 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 ARL2P36404 184 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 RGS19P49795 217 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 SNW1Q13573 536 aaKnown RBP16.12■□□□□ 0.17
BRCA1-223ENST00000494123 PPP2R5AQ15172 486 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 KIZQ2M2Z5 673 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 KANK3Q6NY19 840 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 CELF4Q9BZC1 486 aaKnown RBP16.12■□□□□ 0.17
BRCA1-223ENST00000494123 ZHX3Q9H4I2 956 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 ZMYND8Q9ULU4 1186 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-223ENST00000494123 TANC1Q9C0D5 1861 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 MKI67P46013 3256 aaKnown RBP16.12■□□□□ 0.17
BRCA1-223ENST00000494123 SRGAP2CP0DJJ0 459 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 SYN1P17600 705 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 GLRA2P23416 452 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 GPC3P51654 580 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 CCL23P55773 120 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 GIT2Q14161 759 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 ZNF410Q86VK4 478 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 KSR1Q8IVT5 923 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 GRAMD1CQ8IYS0 662 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 ASAP3Q8TDY4 903 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 PAGE5Q96GU1 130 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 ZNF668Q96K58 619 aaPredicted RBP16.12■□□□□ 0.17
BRCA1-223ENST00000494123 DACT1Q9NYF0 836 aa16.12■□□□□ 0.17
BRCA1-223ENST00000494123 HOOK1Q9UJC3 728 aaKnown RBP16.12■□□□□ 0.17
BRCA1-223ENST00000494123 LRRIQ4A6NIV6 560 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 SFI1A8K8P3 1242 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 CHRNA1P02708 482 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 IDEP14735 1019 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 MCM4P33991 863 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 CRYBB1P53674 252 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-223ENST00000494123 ASIC1P78348 528 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 DMP1Q13316 513 aaPredicted RBP16.11■□□□□ 0.17
BRCA1-223ENST00000494123 FAM26DQ5JW98 314 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 RNF149Q8NC42 400 aa16.11■□□□□ 0.17
BRCA1-223ENST00000494123 SCLYQ96I15 445 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms