RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 EMC2Q15006 297 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 POSTNQ15063 836 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 FAM47CQ5HY64 1035 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 C1orf53Q5VUE5 145 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 IER5Q5VY09 327 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 TAF2Q6P1X5 1199 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 MTHFD1LQ6UB35 978 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 TRMT1LQ7Z2T5 733 aaKnown RBP13.79□□□□□ -0.2
SNX17-208ENST00000493711 NECAB2Q7Z6G3 386 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 RSPH3Q86UC2 560 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 NME8Q8N427 588 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 LMBR1Q8WVP7 490 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 CEP89Q96ST8 783 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 MAP7D2Q96T17 732 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 MTRQ99707 1265 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 PDLIM7Q9NR12 457 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 SETD4Q9NVD3 440 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 TUBE1Q9UJT0 475 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 PCDHA2Q9Y5H9 948 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 COL4A3BPQ9Y5P4 624 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 BRCA2P51587 3418 aa13.79□□□□□ -0.2
SNX17-208ENST00000493711 SMIM35A0A1B0GVV1 85 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 TLR3O15455 904 aaKnown RBP13.78□□□□□ -0.2
SNX17-208ENST00000493711 LETM1O95202 739 aaPredicted RBP13.78□□□□□ -0.2
SNX17-208ENST00000493711 ABCD1P33897 745 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 AFMP43652 599 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 RTP1P59025 263 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 IGBP1P78318 339 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 ADAM17P78536 824 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 MDM2Q00987 491 aaPredicted RBP13.78□□□□□ -0.2
SNX17-208ENST00000493711 MXD4Q14582 209 aaPredicted RBP13.78□□□□□ -0.2
SNX17-208ENST00000493711 PPP2R5AQ15172 486 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 CCDC183Q5T5S1 534 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 CCDC65Q8IXS2 484 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 SLC17A8Q8NDX2 589 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 LRRC15Q8TF66 581 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 DDX12PQ92771 950 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 SENP6Q9GZR1 1112 aaPredicted RBP13.78□□□□□ -0.2
SNX17-208ENST00000493711 C11orf49Q9H6J7 331 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 RMND1Q9NWS8 449 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 SEL1LQ9UBV2 794 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 NOD1Q9Y239 953 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 SZT2Q5T011 3432 aa13.78□□□□□ -0.2
SNX17-208ENST00000493711 A0A087WWV3 80 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 TMEM150BA6NC51 233 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 MYMKA6NI61 221 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 H0YCG3 227 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 TRAK2O60296 914 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 CAND2O75155 1236 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 CDK7P50613 346 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 ASIC1P78348 528 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 ARSHQ5FYA8 562 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 MARCH8Q5T0T0 291 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 FAM102BQ5T8I3 360 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 EFCAB12Q6NXP0 572 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 TMEM92Q6UXU6 159 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 PHLPP2Q6ZVD8 1323 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 CCDC155Q8N6L0 562 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 METTL13Q8N6R0 699 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 PSPC1Q8WXF1 523 aaKnown RBP13.77□□□□□ -0.21
SNX17-208ENST00000493711 IFT74Q96LB3 600 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 TOX2Q96NM4 488 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 GSDMAQ96QA5 445 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 RUSC1Q9BVN2 902 aa13.77□□□□□ -0.21
SNX17-208ENST00000493711 LARSQ9P2J5 1176 aaKnown RBP13.77□□□□□ -0.21
SNX17-208ENST00000493711 GRIN2DO15399 1336 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 DCDC2CA8MYV0 355 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 FAM13AO94988 1023 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 CYP2C9P11712 490 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 SMTNP53814 917 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 POU5F1BQ06416 359 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 DPYDQ12882 1025 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 PSMD2Q13200 908 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 PTK7Q13308 1070 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 GIT2Q14161 759 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 TFDP1Q14186 410 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 PTGISQ16647 500 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 SLC39A5Q6ZMH5 540 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 STXBP4Q6ZWJ1 553 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 UNC13DQ70J99 1090 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 RPAINQ86UA6 219 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 SERINC5Q86VE9 423 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 LINC01465Q8N7H1 131 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 SMARCE1Q969G3 411 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 DNAJC19Q96DA6 116 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 REEP2Q9BRK0 252 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 ANP32EQ9BTT0 268 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 SUGCTQ9HAC7 445 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 PARVGQ9HBI0 331 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 A0A0C4DFX4 3053 aa13.76□□□□□ -0.21
SNX17-208ENST00000493711 HIP1RO75146 1068 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 MAPTP10636 758 aaKnown RBP13.75□□□□□ -0.21
SNX17-208ENST00000493711 PLS3P13797 630 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 IDEP14735 1019 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 ARL2P36404 184 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 ZNF131P52739 623 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 CUL4BQ13620 913 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 KCNB1Q14721 858 aa13.75□□□□□ -0.21
SNX17-208ENST00000493711 SNX17Q15036 470 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms