RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 JAG1P78504 1218 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 EIF4HQ15056 248 aaKnown RBP6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZMAT1Q5H9K5 638 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 UNQ6494/PRO21346Q6UXR6 183 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 KANSL1Q7Z3B3 1105 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 BMP8AQ7Z5Y6 402 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 ZDHHC14Q8IZN3 488 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 LGI4Q8N135 537 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 CNTD1Q8N815 330 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 FEZF2Q8TBJ5 459 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 AJUBAQ96IF1 538 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 KATNBL1Q9H079 304 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 C14orf119Q9NWQ9 140 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 USP18Q9UMW8 372 aa6.65□□□□□ -1.34
HMGB1P38-201ENST00000490557 MYPNQ86TC9 1320 aa6.65□□□□□ -1.35
HMGB1P38-201ENST00000490557 PRSS38A1L453 326 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 OPHN1O60890 802 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 MANFP55145 182 aaKnown RBP6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 SESN2P58004 480 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 UGT8Q16880 541 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 ZBTB41Q5SVQ8 909 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 PARD6AQ9NPB6 346 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 JADE2Q9NQC1 790 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 POLR3BQ9NW08 1133 aaPredicted RBP6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 DENND2AQ9ULE3 1009 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 PCDHB6Q9Y5E3 794 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 PPP2R3BQ9Y5P8 575 aa6.64□□□□□ -1.35
HMGB1P38-201ENST00000490557 B4GALT4O60513 344 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 H2AFYO75367 372 aaKnown RBP6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 CSF2RBP32927 897 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 PDCD1Q15116 288 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 FSCN1Q16658 493 aaKnown RBP6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 CT83Q5H943 113 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 KLHDC10Q6PID8 442 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 AMOTL1Q8IY63 956 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 CDYL2Q8N8U2 506 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 WDR92Q96MX6 357 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 KCNC2Q96PR1 638 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 PITHD1Q9GZP4 211 aaPredicted RBP6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 VTA1Q9NP79 307 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 NUMBLQ9Y6R0 609 aa6.63□□□□□ -1.35
HMGB1P38-201ENST00000490557 A0A0A6YYJ9 748 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 DAPK3O43293 454 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 NRP2O60462 931 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 KATNA1O75449 491 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 ZNF888P0CJ79 500 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 ENPP1P22413 925 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 MRE11P49959 708 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 PPARAQ07869 468 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 PCOLCEQ15113 449 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 SURF1Q15526 300 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 MAN2A1Q16706 1144 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 ARHGEF18Q6ZSZ5 1173 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 TGFBRAP1Q8WUH2 860 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 GAB3Q8WWW8 586 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 RSAD2Q8WXG1 361 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 GFM2Q969S9 779 aaKnown RBP6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 EAF2Q96CJ1 260 aaPredicted RBP6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 CEP89Q96ST8 783 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 KIAA1683Q9H0B3 1180 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 DNAI1Q9UI46 699 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 VWA7Q9Y334 891 aa6.62□□□□□ -1.35
HMGB1P38-201ENST00000490557 ZNF536O15090 1300 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 OTOL1A6NHN0 477 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 LPLP06858 475 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 PFKMP08237 780 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 CNR2P34972 360 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 NRG3P56975 720 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 KLF1Q13351 362 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 SPIDRQ14159 915 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 UBXN11Q5T124 520 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 LMBR1LQ6UX01 489 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 FRMD5Q7Z6J6 570 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 FERMT3Q86UX7 667 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 OR14C36Q8NHC7 312 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 GCDHQ92947 438 aaPredicted RBP6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 MBD6Q96DN6 1003 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 RAX2Q96IS3 184 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 MENTQ9BUN1 341 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 OR10A2Q9H208 303 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 EDARQ9UNE0 448 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 INVSQ9Y283 1065 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 PTPN22Q9Y2R2 807 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 NR2E1Q9Y466 385 aa6.61□□□□□ -1.35
HMGB1P38-201ENST00000490557 B4GALT3O60512 393 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 FSBPO95073 299 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 INHBBP09529 407 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 MTHFD2P13995 350 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 GPR15P49685 360 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 ANTXR2P58335 489 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 ADAM15Q13444 863 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 FZD5Q13467 585 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 MTMR1Q13613 665 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 CLUL1Q15846 466 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 PITRM1Q5JRX3 1037 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 SYDE2Q5VT97 1194 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 AGBL4Q5VU57 503 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 TRIM68Q6AZZ1 485 aa6.6□□□□□ -1.35
HMGB1P38-201ENST00000490557 USP30Q70CQ3 517 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms