RNA–Protein interactions for RNA: ENST00000488249.1

RBM28-207, Transcript of RNA binding motif protein 28, humanhuman

TSL 3

Gene RBM28, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM28-207ENST00000488249 ELL2O00472 640 aaPredicted RBP4.42□□□□□ -1.7
RBM28-207ENST00000488249 MAFGO15525 162 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 BRINP1O60477 761 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 RAB11FIP3O75154 756 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 EYA4O95677 639 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 ITGB3P05106 788 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 CELA3BP08861 270 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 MRE11P49959 708 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 ANTXR2P58335 489 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 PLP2Q04941 152 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 TBR1Q16650 682 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 RNF151Q2KHN1 245 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 AGBL4Q5VU57 503 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 SLFN13Q68D06 897 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 UNQ6494/PRO21346Q6UXR6 183 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 FRMD7Q6ZUT3 714 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 ESPNLQ6ZVH7 1005 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 BMP8AQ7Z5Y6 402 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 RASSF3Q86WH2 238 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 PTPN18Q99952 460 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 SSBP3Q9BWW4 388 aaPredicted RBP4.42□□□□□ -1.7
RBM28-207ENST00000488249 PITHD1Q9GZP4 211 aaPredicted RBP4.42□□□□□ -1.7
RBM28-207ENST00000488249 OR10A2Q9H208 303 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 SEC61A2Q9H9S3 476 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 SPC25Q9HBM1 224 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.42□□□□□ -1.7
RBM28-207ENST00000488249 VWA7Q9Y334 891 aa4.42□□□□□ -1.7
RBM28-207ENST00000488249 A0A0A6YYJ9 748 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.41□□□□□ -1.7
RBM28-207ENST00000488249 NPEPPSL1A6NEC2 478 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 ARHGAP6O43182 974 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 DNAJC6O75061 913 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 ULK1O75385 1050 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 CPEP16870 476 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 RAC3P60763 192 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 NFKB2Q00653 900 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 NFYCQ13952 458 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 RNF187Q5TA31 235 aaPredicted RBP4.41□□□□□ -1.7
RBM28-207ENST00000488249 KLHDC10Q6PID8 442 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 GLB1LQ6UWU2 654 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 USP30Q70CQ3 517 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 LIMS2Q7Z4I7 341 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 NEIL1Q96FI4 390 aaPredicted RBP4.41□□□□□ -1.7
RBM28-207ENST00000488249 LMF1Q96S06 567 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 HAPLN2Q9GZV7 340 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 MEGF9Q9H1U4 602 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 MTG2Q9H4K7 406 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 CNOT11Q9UKZ1 510 aaKnown RBP4.41□□□□□ -1.7
RBM28-207ENST00000488249 DENND2AQ9ULE3 1009 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 FAM184BQ9ULE4 1060 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 NOC2LQ9Y3T9 749 aaKnown RBP4.41□□□□□ -1.7
RBM28-207ENST00000488249 NR2E1Q9Y466 385 aa4.41□□□□□ -1.7
RBM28-207ENST00000488249 KRTAP9-7A8MTY7 169 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 K7ESM1 405 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 KDM1AO60341 852 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 OPHN1O60890 802 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 H2AFYO75367 372 aaKnown RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 POU3F3P20264 500 aaPredicted RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 SESN2P58004 480 aaPredicted RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 SESN3P58005 492 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 ADAM15Q13444 863 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 STAT4Q14765 748 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 ZBTB41Q5SVQ8 909 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 ZNF662Q6ZS27 426 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 HDGFL2Q7Z4V5 671 aaPredicted RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 CXorf67Q86X51 503 aaPredicted RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 CLRN3Q8NCR9 226 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 LPPQ93052 612 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 NKD2Q969F2 451 aaPredicted RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 GFM2Q969S9 779 aaKnown RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 FERMT2Q96AC1 680 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 DYDC2Q96IM9 177 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 LRRC37BQ96QE4 947 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 POLR3BQ9NW08 1133 aaPredicted RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 KCNG1Q9UIX4 513 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 SYNPO2Q9UMS6 1093 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 CTDP1Q9Y5B0 961 aaPredicted RBP4.4□□□□□ -1.71
RBM28-207ENST00000488249 MYPNQ86TC9 1320 aa4.4□□□□□ -1.71
RBM28-207ENST00000488249 ST20-MTHFSA0A0A6YYL1 179 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 PRSS38A1L453 326 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 GPR42O15529 346 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 PCDH8O95206 1070 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 PFKMP08237 780 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 MANFP55145 182 aaKnown RBP4.39□□□□□ -1.71
RBM28-207ENST00000488249 HGFACQ04756 655 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 LHFPL2Q6ZUX7 228 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 CIR1Q86X95 450 aaPredicted RBP4.39□□□□□ -1.71
RBM28-207ENST00000488249 OR14K1Q8NGZ2 314 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 WDR66Q8TBY9 1149 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 CFHR4Q92496 578 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 HIST1H2AHQ96KK5 128 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 WDR92Q96MX6 357 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 GNRHR2Q96P88 292 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 HIST1H2AJQ99878 128 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 NOL10Q9BSC4 688 aaKnown RBP4.39□□□□□ -1.71
RBM28-207ENST00000488249 FAM126AQ9BYI3 521 aaPredicted RBP4.39□□□□□ -1.71
RBM28-207ENST00000488249 KRTAP17-1Q9BYP8 105 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 ANO3Q9BYT9 981 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 WNT8AQ9H1J5 351 aa4.39□□□□□ -1.71
RBM28-207ENST00000488249 PUF60Q9UHX1 559 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms