RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 PRAMEF22A3QJZ6 481 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 MATN2O00339 956 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PLSCR1O15162 318 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 KDM1AO60341 852 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 MAFO75444 373 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 ABLIM3O94929 683 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 FBXO21O94952 628 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 ZRANB2O95218 330 aaKnown RBP eCLIP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 CNOT4O95628 575 aaKnown RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PFKMP08237 780 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 TNFRSF1AP19438 455 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PTGS1P23219 599 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 LSP1P33241 339 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 MAGEA10P43363 369 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 MTNR1BP49286 362 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 RGS3P49796 1198 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 KRT85P78386 507 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 IL13RA1P78552 427 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 TRIM25Q14258 630 aaKnown RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 ODF1Q14990 250 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 SART3Q15020 963 aaKnown RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 LRRC41Q15345 812 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PCBP2Q15366 365 aaKnown RBP eCLIP3.17□□□□□ -1.93e-8■■■□□ 18.9
ITGB1-213ENST00000484088 ZNF174Q15697 407 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 NFE2Q16621 373 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PITRM1Q5JRX3 1037 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 ODR4Q5SWX8 454 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 UBXN11Q5T124 520 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PRAMEF18Q5VWM3 479 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 MTMR8Q96EF0 704 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 AHCYL2Q96HN2 611 aaKnown RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 MAML3Q96JK9 1138 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 SCYL1Q96KG9 808 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 YIPF4Q9BSR8 244 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 SLC13A1Q9BZW2 595 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PITHD1Q9GZP4 211 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 POFUT1Q9H488 388 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 PCIF1Q9H4Z3 704 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 INCENPQ9NQS7 918 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 ZNF277Q9NRM2 450 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 CCM2LQ9NUG4 571 aaPredicted RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 UCKL1Q9NWZ5 548 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 USP36Q9P275 1121 aaKnown RBP3.17□□□□□ -1.9
ITGB1-213ENST00000484088 MSRAQ9UJ68 235 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 NUB1Q9Y5A7 615 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 EID1Q9Y6B2 187 aa3.17□□□□□ -1.9
ITGB1-213ENST00000484088 A0A0A6YYK5 440 aaPredicted RBP3.16□□□□□ -1.9
ITGB1-213ENST00000484088 C9orf118A6NHY6 69 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 MATN3O15232 486 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 AKAP10O43572 662 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 RBP3P10745 1247 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 ZNF20P17024 532 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 CD40P25942 277 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 CSF2RBP32927 897 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 EPHB4P54760 987 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 GJA9P57773 515 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 NKX3-2P78367 333 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 ITKQ08881 620 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 DUSP8Q13202 625 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 FSCN1Q16658 493 aaKnown RBP3.16□□□□□ -1.9
ITGB1-213ENST00000484088 SKIDA1Q1XH10 827 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 SPATS1Q496A3 300 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 IQSEC1Q6DN90 963 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 TTLL7Q6ZT98 887 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 FRMD7Q6ZUT3 714 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 C11orf74Q86VG3 221 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 TSPEARQ8WU66 669 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 FUBP3Q96I24 572 aaKnown RBP eCLIP3.16□□□□□ -1.9
ITGB1-213ENST00000484088 FAXDC2Q96IV6 333 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 C8orf49Q96NF6 230 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 SOX7Q9BT81 388 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 MYL10Q9BUA6 226 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 RHOBTB2Q9BYZ6 727 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 TCF7L1Q9HCS4 588 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 GALNT8Q9NY28 637 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 ST6GALNAC2Q9UJ37 374 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 ADAM29Q9UKF5 820 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 CNOT11Q9UKZ1 510 aaKnown RBP3.16□□□□□ -1.9
ITGB1-213ENST00000484088 DENND2AQ9ULE3 1009 aa3.16□□□□□ -1.9
ITGB1-213ENST00000484088 UBA6A0AVT1 1052 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-213ENST00000484088 SHTN1A0MZ66 631 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 PATE3B3GLJ2 98 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 C1QTNF3-AMACRE9PGA6 284 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 PRPF6O94906 941 aaKnown RBP3.15□□□□□ -1.91
ITGB1-213ENST00000484088 MT-CO1P00395 513 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 S100BP04271 92 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-213ENST00000484088 APPP05067 770 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 ENO2P09104 434 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-213ENST00000484088 CLEC2LP0C7M8 214 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 ZNF888P0CJ79 500 aaPredicted RBP3.15□□□□□ -1.91
ITGB1-213ENST00000484088 ENPP1P22413 925 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 ECE1P42892 770 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 RAB27AP51159 221 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 EPHB1P54762 984 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 SCAND1P57086 179 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 ANTXR2P58335 489 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 SLC6A3Q01959 620 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 ADCY1Q08828 1119 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 FAPQ12884 760 aa3.15□□□□□ -1.91
ITGB1-213ENST00000484088 NFATC3Q12968 1075 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms