RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 SYMPKQ92797 1274 aaKnown RBP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 AATFQ9NY61 560 aaKnown RBP eCLIP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 RGL1Q9NZL6 768 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 SALL4Q9UJQ4 1053 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 CCPG1Q9ULG6 757 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 XDHP47989 1333 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 NEURL1BA8MQ27 555 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 PYGBP11216 843 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 POLD1P28340 1107 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 BPIFB4P59827 614 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 GRAMD1BQ3KR37 738 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 RNF207Q6ZRF8 634 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 KRT28Q7Z3Y7 464 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 ZCRB1Q8TBF4 217 aaKnown RBP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 MAGOHBQ96A72 148 aaKnown RBP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 ANGPTL2Q9UKU9 493 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 DAAM1Q9Y4D1 1078 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 WDR19Q8NEZ3 1342 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 TYW5A2RUC4 315 aaKnown RBP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 TRIM49BA6NDI0 452 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 TNNC2P02585 160 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 KRT4P19013 534 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 CTDSPL2Q05D32 466 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 SLC12A1Q13621 1099 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 GCKRQ14397 625 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 FAM133BQ5BKY9 247 aaKnown RBP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 MTHFD1LQ6UB35 978 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 KSR1Q8IVT5 923 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 MYOCDQ8IZQ8 938 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 GALNT15Q8N3T1 639 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 OR9Q1Q8NGQ5 310 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 MED10Q9BTT4 135 aa12.33□□□□□ -0.44
U2AF1-209ENST00000475639 G3BP2Q9UN86 482 aaKnown RBP12.33□□□□□ -0.44
U2AF1-209ENST00000475639 CFAP73A6NFT4 308 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 A8MUI8 341 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 TTI1O43156 1089 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 CFBP00751 764 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 ALDH5A1P51649 535 aaPredicted RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 TIMM10P62072 90 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 DAB2P98082 770 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 FLOT2Q14254 428 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 REXO1Q8N1G1 1221 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 NUDCD1Q96RS6 583 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 FGFR1OP2Q9NVK5 253 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 DDX39AO00148 427 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 FAM163BP0C2L3 166 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 CCND1P24385 295 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 SPATA21Q7Z572 469 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 DZIP3Q86Y13 1208 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 BEGAINQ9BUH8 593 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 NOVA2Q9UNW9 492 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 PDS5AQ29RF7 1337 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 A6NJR5 290 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 ECHS1P30084 290 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 NSFP46459 744 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 TUBP50607 506 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 USP4Q13107 963 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 PCGF5Q86SE9 256 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 TEX9Q8N6V9 391 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 CENPKQ9BS16 269 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 LSM14BQ9BX40 385 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 CDV3Q9UKY7 258 aaKnown RBP12.32□□□□□ -0.44
U2AF1-209ENST00000475639 SPDYE5A6NIY4 337 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 F8W8V4 182 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 PDIA5Q14554 519 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 PPP1R15BQ5SWA1 713 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 MDM1Q8TC05 714 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 PCDHA13Q9Y5I0 950 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 STK36Q9NRP7 1315 aa12.32□□□□□ -0.44
U2AF1-209ENST00000475639 POTEB3A0JP26 581 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 PLEKHG3A1L390 1219 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 RIMBP2O15034 1052 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 CTNND1O60716 968 aaKnown RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 EFCAB14O75071 495 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 CHEK2O96017 543 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 MAGOHP61326 146 aaKnown RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 POTEBQ6S5H4 581 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 NOP9Q86U38 636 aaKnown RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 RNF169Q8NCN4 708 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 CEP70Q8NHQ1 597 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 OXER1Q8TDS5 423 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 APPBP2Q92624 585 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 TTC25Q96NG3 672 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 MTRQ99707 1265 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 FOXP1Q9H334 677 aaPredicted RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 CHCHD3Q9NX63 227 aaKnown RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 GDAQ9Y2T3 454 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 STXBP3O00186 592 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 TMEM191BP0C7N4 346 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 NQO1P15559 274 aaKnown RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 RANBP1P43487 201 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 PDE6CP51160 858 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 OCRLQ01968 901 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 PPM1KQ8N3J5 372 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 ZNF317Q96PQ6 595 aaPredicted RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 RPS6KC1Q96S38 1066 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 LRRC4CQ9HCJ2 640 aa12.31□□□□□ -0.44
U2AF1-209ENST00000475639 RTCBQ9Y3I0 505 aaKnown RBP12.31□□□□□ -0.44
U2AF1-209ENST00000475639 ESRRAP11474 423 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 193.6 ms