RNA–Protein interactions for RNA: ENST00000474539.5

CCNL1-215, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 4,799 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-215ENST00000474539 ANO4Q32M45 955 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 ZNF658Q5TYW1 1059 aaPredicted RBP4.98□□□□□ -1.61
CCNL1-215ENST00000474539 CES5AQ6NT32 575 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 POTEBQ6S5H4 581 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 ZNF410Q86VK4 478 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 CCDC170Q8IYT3 715 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 NLRP4Q96MN2 994 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 SLITRK1Q96PX8 696 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 CENPKQ9BS16 269 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 PRDM16Q9HAZ2 1276 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 UBQLN1Q9UMX0 589 aaKnown RBP4.98□□□□□ -1.61
CCNL1-215ENST00000474539 PPLO60437 1756 aa4.98□□□□□ -1.61
CCNL1-215ENST00000474539 SPDYE16A6NNV3 312 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TOMM70O94826 608 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 IGKV5-2P06315 115 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 SLFN14P0C7P3 912 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CYP2C9P11712 490 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CDK17Q00537 523 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 DNM1Q05193 864 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 MKRN3Q13064 507 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 ITPK1Q13572 414 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TSGA10IPQ3SY00 556 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 INTS5Q6P9B9 1019 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 DYMQ7RTS9 669 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 PEX26Q7Z412 305 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 RYBPQ8N488 228 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 OR8K1Q8NGG5 319 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 N4BP2L2Q92802 583 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 SRPK1Q96SB4 655 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 FAM96AQ9H5X1 160 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 GPRC5DQ9NZD1 345 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 A0A0D9SFI3 127 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TMEM110-MUSTN1A8MSY1 372 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 PI4K2BG5E9Z4 385 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 I3L4J1 428 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 MTSS1O43312 755 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 NR3C2P08235 984 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CCNE1P24864 410 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CYP2C19P33261 490 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 AARSP49588 968 aaKnown RBP eCLIP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 FOXO4P98177 505 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 APBA1Q02410 837 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 PTPN11Q06124 597 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 WASHC5Q12768 1159 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TMEM132DQ14C87 1099 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 SETDB1Q15047 1291 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 QRICH1Q2TAL8 776 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 MEI1Q5TIA1 1274 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CTR9Q6PD62 1173 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 PADI6Q6TGC4 694 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 KRBA2Q6ZNG9 492 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 THNSL1Q8IYQ7 743 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 RIN2Q8WYP3 895 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TSC1Q92574 1164 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CDCA5Q96FF9 252 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 RBM41Q96IZ5 413 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 BAG1Q99933 345 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 WDR18Q9BV38 432 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 LSM14BQ9BX40 385 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 FHDC1Q9C0D6 1143 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 WDR70Q9NW82 654 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 RRN3Q9NYV6 651 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 SH3BP1Q9Y3L3 701 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 AFG3L2Q9Y4W6 797 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TRIM17Q9Y577 477 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 PHLPP1O60346 1717 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 COL1A1P02452 1464 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 SMAPO00193 183 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 MCF2LO15068 1137 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 VIL1P09327 827 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TCP1P17987 556 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 MAP2K2P36507 400 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 IRX4P78413 519 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 ITKQ08881 620 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 IKBKEQ14164 716 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 GEN1Q17RS7 908 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 PCGF5Q86SE9 256 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 METTL3Q86U44 580 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 OR6B3Q8NGW1 331 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 MRPS31Q92665 395 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 P2RX5Q93086 422 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 FAM149B1Q96BN6 582 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 VPS39Q96JC1 886 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TRIM54Q9BYV2 358 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CYP26B1Q9NR63 512 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TMEM39AQ9NV64 488 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 DDX56Q9NY93 547 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 RPTORQ8N122 1335 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 PRKCBP05771 671 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 APOA4P06727 396 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 SETSIPP0DME0 302 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 DLATP10515 647 aaKnown RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 RXRAP19793 462 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 NR2F2P24468 414 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 CXCL9Q07325 125 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 IFRD2Q12894 506 aaPredicted RBP4.97□□□□□ -1.61
CCNL1-215ENST00000474539 MORC3Q14149 939 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 TMED2Q15363 201 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 RAB30Q15771 203 aa4.97□□□□□ -1.61
CCNL1-215ENST00000474539 ZNF699Q32M78 642 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms