RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 PAGE5Q96GU1 130 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 AK8Q96MA6 479 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 NAP1L4Q99733 375 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 TRAIPQ9BWF2 469 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SPZ1Q9BXG8 430 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 NAA15Q9BXJ9 866 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SRRTQ9BXP5 876 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 RAB34Q9BZG1 259 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 ZC3H12CQ9C0D7 883 aaKnown RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 LRRC27Q9C0I9 530 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 GLT8D2Q9H1C3 349 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 PODXL2Q9NZ53 605 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 MAGEC2Q9UBF1 373 aaPredicted RBP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 SWAP70Q9UH65 585 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 PPP1R9AQ9ULJ8 1098 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 NFE2L3Q9Y4A8 694 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 ECM29Q5VYK3 1845 aa6.6□□□□□ -1.35
ATPAF1-204ENST00000474020 LY75O60449 1722 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 KIAA1551Q9HCM1 1747 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 MYO3BQ8WXR4 1341 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 ZNF862O60290 1169 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 ADAMTS4O75173 837 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 WNT11O96014 354 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 PRPHP41219 470 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 AFMP43652 599 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 MAPK8P45983 427 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CDK8P49336 464 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 SARSP49591 514 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 IRAK1P51617 712 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CCZ1BP86790 482 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CCZ1P86791 482 aaPredicted RBP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 RBM10P98175 930 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CYP27A1Q02318 531 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 NCAPHQ15003 741 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 NONOQ15233 471 aaKnown RBP eCLIP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 MSMPQ1L6U9 139 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 ASPRV1Q53RT3 343 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 RRAGBQ5VZM2 374 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 SEZ6L2Q6UXD5 910 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 C16orf86Q6ZW13 317 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 KRT27Q7Z3Y8 459 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 PDZD3Q86UT5 571 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 FAM114A1Q8IWE2 563 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 NLGN1Q8N2Q7 840 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 NOC3LQ8WTT2 800 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CCDC51Q96ER9 411 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CALML4Q96GE6 196 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 RTFDC1Q9BY42 306 aaPredicted RBP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 ATXN3LQ9H3M9 355 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 FANCLQ9NW38 375 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 BARHL2Q9NY43 387 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CRIM1Q9NZV1 1036 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 CGNQ9P2M7 1197 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 SAP30BPQ9UHR5 308 aaKnown RBP6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 JAG2Q9Y219 1238 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 PCDHGC5Q9Y5F6 944 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 DLEC1Q9Y238 1755 aa6.59□□□□□ -1.35
ATPAF1-204ENST00000474020 GAKO14976 1311 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 FLT1P17948 1338 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 FAM205AQ6ZU69 1335 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 IRS2Q9Y4H2 1338 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 A0A087WWV3 80 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 hCG_1642624A0A1W2PR95 340 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 BICDL2A1A5D9 508 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 FAM170BA6NMN3 283 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 AKR1B15C9JRZ8 316 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 KLRF2D3W0D1 207 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 UBE2Q2LH0YL09 131 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 PSMA7O14818 248 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 STX10O60499 249 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 NMT2O60551 498 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 OR52Z1P0C646 297 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 GYS1P13807 737 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 NPR1P16066 1061 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 ADCY7P51828 1080 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 ID3Q02535 119 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 PAK1Q13153 545 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 SLC4A8Q2Y0W8 1093 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 ALG1LQ6GMV1 187 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 KLHL10Q6JEL2 608 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 DPP8Q6V1X1 898 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 CNGA4Q8IV77 575 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 C3orf58Q8NDZ4 430 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 MNS1Q8NEH6 495 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 TBC1D16Q8TBP0 767 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 ZNF384Q8TF68 577 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 ERO1AQ96HE7 468 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 CDK5RAP3Q96JB5 506 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 FANCD2OSQ96PS1 177 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 BAG1Q99933 345 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 TMEM47Q9BQJ4 181 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 C1GALT1Q9NS00 363 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 ARGLU1Q9NWB6 273 aaPredicted RBP6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 TRMT1Q9NXH9 659 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 RWDD2AQ9UIY3 292 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 ATP6V0A2Q9Y487 856 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 DAGLAQ9Y4D2 1042 aa6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 OAS3Q9Y6K5 1087 aaKnown RBP6.58□□□□□ -1.36
ATPAF1-204ENST00000474020 NAV1Q8NEY1 1877 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 186.7 ms