RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 ZNF668Q96K58 619 aaPredicted RBP23.5■■□□□ 1.35
SREBF1-210ENST00000471445 LLPHQ9BRT6 129 aaKnown RBP23.5■■□□□ 1.35
SREBF1-210ENST00000471445 RNF216Q9NWF9 866 aaPredicted RBP23.5■■□□□ 1.35
SREBF1-210ENST00000471445 PCDHB7Q9Y5E2 793 aa23.5■■□□□ 1.35
SREBF1-210ENST00000471445 MYO7AQ13402 2215 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 TTC28Q96AY4 2481 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 DDX11L8A8MPP1 907 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 WNT7AO00755 349 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 MARCH6O60337 910 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 RBM25P49756 843 aaKnown RBP23.49■■□□□ 1.35
SREBF1-210ENST00000471445 NCAPH2Q6IBW4 605 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 C4orf19Q8IY42 314 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 P2RX5Q93086 422 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 SCLT1Q96NL6 688 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 LXNQ9BS40 222 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 ELAC1Q9H777 363 aaKnown RBP23.49■■□□□ 1.35
SREBF1-210ENST00000471445 CYP26B1Q9NR63 512 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 TMEM161AQ9NX61 479 aa23.49■■□□□ 1.35
SREBF1-210ENST00000471445 GRM6O15303 877 aa23.48■■□□□ 1.35
SREBF1-210ENST00000471445 BAG4O95429 457 aaKnown RBP23.48■■□□□ 1.35
SREBF1-210ENST00000471445 FAM189BP81408 668 aa23.48■■□□□ 1.35
SREBF1-210ENST00000471445 NLRP7Q8WX94 980 aa23.48■■□□□ 1.35
SREBF1-210ENST00000471445 ZSCAN31Q96LW9 406 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-210ENST00000471445 JPH2Q9BR39 696 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-210ENST00000471445 NSUN3Q9H649 340 aaKnown RBP23.48■■□□□ 1.35
SREBF1-210ENST00000471445 UBE2ZQ9H832 354 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-210ENST00000471445 SH2B1Q9NRF2 756 aaPredicted RBP23.48■■□□□ 1.35
SREBF1-210ENST00000471445 PPME1Q9Y570 386 aa23.48■■□□□ 1.35
SREBF1-210ENST00000471445 NEMFO60524 1076 aa23.47■■□□□ 1.35
SREBF1-210ENST00000471445 IBSPP21815 317 aaPredicted RBP23.47■■□□□ 1.35
SREBF1-210ENST00000471445 NPEPPSP55786 919 aa23.47■■□□□ 1.35
SREBF1-210ENST00000471445 CDC42EP1Q00587 391 aa23.47■■□□□ 1.35
SREBF1-210ENST00000471445 CALCRLQ16602 461 aa23.47■■□□□ 1.35
SREBF1-210ENST00000471445 NAALADL2Q58DX5 795 aa23.47■■□□□ 1.35
SREBF1-210ENST00000471445 TCEAL5Q5H9L2 206 aa23.47■■□□□ 1.35
SREBF1-210ENST00000471445 ZNF410Q86VK4 478 aa23.47■■□□□ 1.35
SREBF1-210ENST00000471445 UHRF1Q96T88 793 aaPredicted RBP23.47■■□□□ 1.35
SREBF1-210ENST00000471445 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.46■■□□□ 1.35
SREBF1-210ENST00000471445 DNM2P50570 870 aa23.46■■□□□ 1.35
SREBF1-210ENST00000471445 HMGN5P82970 282 aaKnown RBP23.46■■□□□ 1.35
SREBF1-210ENST00000471445 DYDC2Q96IM9 177 aa23.46■■□□□ 1.35
SREBF1-210ENST00000471445 GCOM2Q9BZD3 368 aaPredicted RBP23.46■■□□□ 1.35
SREBF1-210ENST00000471445 DHX33Q9H6R0 707 aaKnown RBP23.46■■□□□ 1.35
SREBF1-210ENST00000471445 ATP6V0A4Q9HBG4 840 aa23.46■■□□□ 1.35
SREBF1-210ENST00000471445 RGL1Q9NZL6 768 aa23.46■■□□□ 1.35
SREBF1-210ENST00000471445 TNFRSF10AO00220 468 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 ZSCAN20P17040 1043 aaPredicted RBP23.45■■□□□ 1.34
SREBF1-210ENST00000471445 FGFR4P22455 802 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 YWHABP31946 246 aaKnown RBP23.45■■□□□ 1.34
SREBF1-210ENST00000471445 GUCY1B3Q02153 619 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 CYP4A11Q02928 519 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 COL19A1Q14993 1142 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 FAM102BQ5T8I3 360 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 ZNF579Q8NAF0 562 aaKnown RBP23.45■■□□□ 1.34
SREBF1-210ENST00000471445 C8orf76Q96K31 380 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 CEP170P1Q96L14 293 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 RNF19AQ9NV58 838 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 SUCLA2Q9P2R7 463 aaPredicted RBP23.45■■□□□ 1.34
SREBF1-210ENST00000471445 PLAGL2Q9UPG8 496 aa23.45■■□□□ 1.34
SREBF1-210ENST00000471445 XIRP2A4UGR9 3374 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 A0A087WZ62 844 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 TBKBP1A7MCY6 615 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 ITGB1P05556 798 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 FGFR1P11362 822 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 RFC5P40937 340 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 CAMK1Q14012 370 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 CTTNQ14247 550 aaKnown RBP23.44■■□□□ 1.34
SREBF1-210ENST00000471445 SAFBQ15424 915 aaKnown RBP eCLIP23.44■■□□□ 1.34
SREBF1-210ENST00000471445 RHPN2Q8IUC4 686 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 NEK9Q8TD19 979 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 SLC7A3Q8WY07 619 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 MTMR9Q96QG7 549 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 FDXACB1Q9BRP7 624 aaPredicted RBP23.44■■□□□ 1.34
SREBF1-210ENST00000471445 ZSWIM4Q9H7M6 989 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 PCDHA12Q9UN75 941 aa23.44■■□□□ 1.34
SREBF1-210ENST00000471445 SFPQP23246 707 aaKnown RBP eCLIP23.43■■□□□ 1.34
SREBF1-210ENST00000471445 POLGP54098 1239 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-210ENST00000471445 ECHDC2Q86YB7 292 aa23.43■■□□□ 1.34
SREBF1-210ENST00000471445 KLHL23Q8NBE8 558 aa23.43■■□□□ 1.34
SREBF1-210ENST00000471445 NECAB3Q96P71 396 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-210ENST00000471445 EIF2AK1Q9BQI3 630 aaKnown RBP23.43■■□□□ 1.34
SREBF1-210ENST00000471445 TMEM117Q9H0C3 514 aa23.43■■□□□ 1.34
SREBF1-210ENST00000471445 TTC12Q9H892 705 aaPredicted RBP23.43■■□□□ 1.34
SREBF1-210ENST00000471445 ALG13Q9NP73 1137 aaKnown RBP23.43■■□□□ 1.34
SREBF1-210ENST00000471445 HCSTQ9UBK5 93 aa23.43■■□□□ 1.34
SREBF1-210ENST00000471445 HOXA2O43364 376 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 GAS2O43903 313 aaKnown RBP23.42■■□□□ 1.34
SREBF1-210ENST00000471445 CSDE1O75534 798 aaKnown RBP23.42■■□□□ 1.34
SREBF1-210ENST00000471445 SLITRK3O94933 977 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 LYPLA2O95372 231 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 KCNA5P22460 613 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 EMC2Q15006 297 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 RABEP1Q15276 862 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 LEXMQ3ZCV2 418 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 OTUD6AQ7L8S5 288 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 KSR1Q8IVT5 923 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 EXOC8Q8IYI6 725 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 SPPL3Q8TCT6 385 aa23.42■■□□□ 1.34
SREBF1-210ENST00000471445 PABPC5Q96DU9 382 aaKnown RBP23.42■■□□□ 1.34
SREBF1-210ENST00000471445 NLRP4Q96MN2 994 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms