RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 NPEPPSP55786 919 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 DALRD3Q5D0E6 543 aaKnown RBP13.38□□□□□ -0.27
USP11-206ENST00000469080 KLHL7Q8IXQ5 586 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 RUSC1Q9BVN2 902 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 WDR11Q9BZH6 1224 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 GPRC5CQ9NQ84 441 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 PAPPAQ13219 1627 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 CACNA1SQ13698 1873 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 GOLGA6L10A6NI86 522 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 LAD1O00515 517 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 WNT10BO00744 389 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 OPLAHO14841 1288 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 FKBP3Q00688 224 aaKnown RBP13.38□□□□□ -0.27
USP11-206ENST00000469080 PLA2G4FQ68DD2 849 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 FAM228AQ86W67 206 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 NOA1Q8NC60 698 aaKnown RBP13.38□□□□□ -0.27
USP11-206ENST00000469080 NT5C3AQ9H0P0 336 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 SMCHD1A6NHR9 2005 aa13.38□□□□□ -0.27
USP11-206ENST00000469080 EHHADHQ08426 723 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.37□□□□□ -0.27
USP11-206ENST00000469080 TMEM139Q8IV31 216 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 MAB21L3Q8N8X9 362 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 CDC23Q9UJX2 597 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 K7ENM7 598 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 MEIS2O14770 477 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 GFPT2O94808 682 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 DLATP10515 647 aaKnown RBP13.37□□□□□ -0.27
USP11-206ENST00000469080 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 XKR9Q5GH70 373 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 LMBRD2Q68DH5 695 aaPredicted RBP13.37□□□□□ -0.27
USP11-206ENST00000469080 SUPT20HQ8NEM7 779 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 LIMA1Q9UHB6 759 aaKnown RBP13.37□□□□□ -0.27
USP11-206ENST00000469080 HPCAL4Q9UM19 191 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 PCDHGC5Q9Y5F6 944 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 COL4A3BPQ9Y5P4 624 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 GOLGA6BA6NDN3 693 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 RCCD1A6NED2 376 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 AHCYL1O43865 530 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 EEF1GP26641 437 aaKnown RBP13.37□□□□□ -0.27
USP11-206ENST00000469080 KRT83P78385 493 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 HLTFQ14527 1009 aaKnown RBP eCLIP13.37□□□□□ -0.27
USP11-206ENST00000469080 TNIP1Q15025 636 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 ARHGEF16Q5VV41 709 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 HS2ST1Q7LGA3 356 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 MFN1Q8IWA4 741 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 FUKQ8N0W3 1084 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 PANX2Q96RD6 677 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 RUFY1Q96T51 708 aa13.37□□□□□ -0.27
USP11-206ENST00000469080 IQCGQ9H095 443 aaKnown RBP13.37□□□□□ -0.27
USP11-206ENST00000469080 CNOT7Q9UIV1 285 aaKnown RBP13.37□□□□□ -0.27
USP11-206ENST00000469080 XRCC5P13010 732 aaKnown RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 GMPSP49915 693 aaPredicted RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 KIF11P52732 1056 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 NFRKBQ6P4R8 1299 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 SIAH1Q8IUQ4 282 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 DYDC1Q8WWB3 177 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 MS4A14Q96JA4 679 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 MYO1AQ9UBC5 1043 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 IRS2Q9Y4H2 1338 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 ESYT3A0FGR9 886 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 SHOX2O60902 331 aaPredicted RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 CYP11B2P19099 503 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 MAN2A1Q16706 1144 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 EAPPQ56P03 285 aaPredicted RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 ZNF746Q6NUN9 644 aaPredicted RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 CYFIP1Q7L576 1253 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 RBM12BQ8IXT5 1001 aaKnown RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 U2AF1L4Q8WU68 220 aaKnown RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 CHD4Q14839 1912 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 PDS5AQ29RF7 1337 aaKnown RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 DDX60Q8IY21 1712 aaKnown RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 IPO5O00410 1097 aaKnown RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 PLSCR1O15162 318 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 TACC1O75410 805 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 ZNF189O75820 626 aaPredicted RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 ANGEL2Q5VTE6 544 aaKnown RBP13.36□□□□□ -0.27
USP11-206ENST00000469080 SFMBT2Q5VUG0 894 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 SEPT14Q6ZU15 432 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 DPH6Q7L8W6 267 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 SPATA20Q8TB22 786 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 ANKS1AQ92625 1134 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 ALS2CR12Q96Q35 445 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 TCHPQ9BT92 498 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
USP11-206ENST00000469080 WNK3Q9BYP7 1800 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 TBX2Q13207 712 aaPredicted RBP13.35□□□□□ -0.27
USP11-206ENST00000469080 MSL3Q8N5Y2 521 aaKnown RBP13.35□□□□□ -0.27
USP11-206ENST00000469080 IL31RAQ8NI17 732 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 PPP1R13LQ8WUF5 828 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 MTMR9Q96QG7 549 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 MYOZ2Q9NPC6 264 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 NYAP2Q9P242 653 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 STK17AQ9UEE5 414 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 SERPINA10Q9UK55 444 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 ZNRF3Q9ULT6 936 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 CLEC11AQ9Y240 323 aa13.35□□□□□ -0.27
USP11-206ENST00000469080 SAR1BQ9Y6B6 198 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms