RNA–Protein interactions for RNA: ENST00000467378.1

USP11-205, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 696 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-205ENST00000467378 EPC2Q52LR7 807 aa21.39■■□□□ 1.01
USP11-205ENST00000467378 MARCH8Q5T0T0 291 aa21.39■■□□□ 1.01
USP11-205ENST00000467378 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.39■■□□□ 1.01
USP11-205ENST00000467378 CKAP2LQ8IYA6 745 aa21.39■■□□□ 1.01
USP11-205ENST00000467378 LMBR1Q8WVP7 490 aa21.39■■□□□ 1.01
USP11-205ENST00000467378 ZNF396Q96N95 335 aaPredicted RBP21.39■■□□□ 1.01
USP11-205ENST00000467378 NRBP2Q9NSY0 501 aa21.39■■□□□ 1.01
USP11-205ENST00000467378 CLDND1Q9NY35 253 aa21.39■■□□□ 1.01
USP11-205ENST00000467378 TFIP11Q9UBB9 837 aaKnown RBP21.39■■□□□ 1.01
USP11-205ENST00000467378 LRWD1Q9UFC0 647 aa21.39■■□□□ 1.01
USP11-205ENST00000467378 RRN3P2A6NIE6 340 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 ZBTB42B2RXF5 422 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 TREHO43280 583 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 AMHP03971 560 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 OATP04181 439 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 SPATA31C1P0DKV0 1188 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 GNAT1P11488 350 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 NASPP49321 788 aaPredicted RBP21.38■■□□□ 1.01
USP11-205ENST00000467378 GPM6BQ13491 265 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 CTTNQ14247 550 aaKnown RBP21.38■■□□□ 1.01
USP11-205ENST00000467378 ZNF484Q5JVG2 852 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 TRMT1LQ7Z2T5 733 aaKnown RBP21.38■■□□□ 1.01
USP11-205ENST00000467378 C4orf19Q8IY42 314 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 MYOCDQ8IZQ8 938 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 FAM167AQ96KS9 214 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 SAMD11Q96NU1 681 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 LXNQ9BS40 222 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 DAXXQ9UER7 740 aaPredicted RBP21.38■■□□□ 1.01
USP11-205ENST00000467378 MORC2Q9Y6X9 1032 aaPredicted RBP21.38■■□□□ 1.01
USP11-205ENST00000467378 TECTAO75443 2155 aa21.38■■□□□ 1.01
USP11-205ENST00000467378 COL1A2P08123 1366 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 VWA3AA6NCI4 1184 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 DKC1O60832 514 aaKnown RBP eCLIP21.37■■□□□ 1.01
USP11-205ENST00000467378 CYP4A11Q02928 519 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 SLC39A14Q15043 492 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 FOXD4L6Q3SYB3 417 aaPredicted RBP21.37■■□□□ 1.01
USP11-205ENST00000467378 XKR3Q5GH77 459 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 FOXD4L3Q6VB84 417 aaPredicted RBP21.37■■□□□ 1.01
USP11-205ENST00000467378 CATSPER3Q86XQ3 398 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 TPH2Q8IWU9 490 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 PRSS33Q8NF86 280 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 TRAPPC12Q8WVT3 735 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 POLR3CQ9BUI4 534 aaPredicted RBP21.37■■□□□ 1.01
USP11-205ENST00000467378 NIFKQ9BYG3 293 aaKnown RBP21.37■■□□□ 1.01
USP11-205ENST00000467378 RAB34Q9BZG1 259 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 NSUN3Q9H649 340 aaKnown RBP21.37■■□□□ 1.01
USP11-205ENST00000467378 ZSWIM4Q9H7M6 989 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 MUTYHQ9UIF7 546 aa21.37■■□□□ 1.01
USP11-205ENST00000467378 MBLAC1A4D2B0 266 aaPredicted RBP21.36■■□□□ 1.01
USP11-205ENST00000467378 H3BNC9 293 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 MED24O75448 989 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 LYPLA2O95372 231 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 RPA1P27694 616 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 IGBP1P78318 339 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 NUCB2P80303 420 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 GRIN1Q05586 938 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 PTK7Q13308 1070 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 ZNF618Q5T7W0 954 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 ATL3Q6DD88 541 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 ANO5Q75V66 913 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 SERINC5Q86VE9 423 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 LINC00301Q8NCQ3 95 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 TUFT1Q9NNX1 390 aa21.36■■□□□ 1.01
USP11-205ENST00000467378 DDX11L8A8MPP1 907 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 PP2D1A8MPX8 630 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 PTPN5P54829 565 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 HTRA4P83105 476 aaPredicted RBP21.35■■□□□ 1.01
USP11-205ENST00000467378 DNM1Q05193 864 aaKnown RBP21.35■■□□□ 1.01
USP11-205ENST00000467378 TARBP2Q15633 366 aaKnown RBP21.35■■□□□ 1.01
USP11-205ENST00000467378 CLUL1Q15846 466 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 RPAINQ86UA6 219 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 ERMNQ8TAM6 284 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 SP7Q8TDD2 431 aaPredicted RBP21.35■■□□□ 1.01
USP11-205ENST00000467378 WNT8BQ93098 351 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 CEP89Q96ST8 783 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 MMTAG2Q9BU76 263 aaKnown RBP21.35■■□□□ 1.01
USP11-205ENST00000467378 FBXO2Q9UK22 296 aaPredicted RBP21.35■■□□□ 1.01
USP11-205ENST00000467378 STK24Q9Y6E0 443 aa21.35■■□□□ 1.01
USP11-205ENST00000467378 LOXHD1Q8IVV2 1947 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 TMEM150BA6NC51 233 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 ZBTB39O15060 712 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 KLRC1P26715 233 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 MARCKSP29966 332 aaPredicted RBP21.34■■□□□ 1.01
USP11-205ENST00000467378 CDC25AP30304 524 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 MBTPS1Q14703 1052 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 TRIM71Q2Q1W2 868 aaKnown RBP21.34■■□□□ 1.01
USP11-205ENST00000467378 HERC4Q5GLZ8 1057 aaPredicted RBP21.34■■□□□ 1.01
USP11-205ENST00000467378 MTHFD1LQ6UB35 978 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 DBF4BQ8NFT6 615 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 ZBTB10Q96DT7 871 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 YME1L1Q96TA2 773 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 POP1Q99575 1024 aaKnown RBP21.34■■□□□ 1.01
USP11-205ENST00000467378 SEPT9Q9UHD8 586 aaPredicted RBP21.34■■□□□ 1.01
USP11-205ENST00000467378 TUBE1Q9UJT0 475 aa21.34■■□□□ 1.01
USP11-205ENST00000467378 SRPRBQ9Y5M8 271 aaKnown RBP21.34■■□□□ 1.01
USP11-205ENST00000467378 YEATS4O95619 227 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 MUTP22033 750 aa21.33■■□□□ 1.01
USP11-205ENST00000467378 YWHABP31946 246 aaKnown RBP21.33■■□□□ 1.01
USP11-205ENST00000467378 LONP1P36776 959 aaKnown RBP21.33■■□□□ 1.01
USP11-205ENST00000467378 STK38Q15208 465 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms