RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 AMPD3Q01432 767 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 FAM160A1Q05DH4 1040 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 MGAT3Q09327 533 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 DRP2Q13474 957 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 MXD4Q14582 209 aaPredicted RBP17.75■□□□□ 0.43
GPC1-207ENST00000466624 ARSHQ5FYA8 562 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 TRAF7Q6Q0C0 670 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 GPBP1Q86WP2 473 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 CEP57L1Q8IYX8 460 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 FMR1NBQ8N0W7 255 aaPredicted RBP17.75■□□□□ 0.43
GPC1-207ENST00000466624 ENGASEQ8NFI3 743 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 KIFAP3Q92845 792 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 DRC1Q96MC2 740 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 PRDM5Q9NQX1 630 aaPredicted RBP17.75■□□□□ 0.43
GPC1-207ENST00000466624 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
GPC1-207ENST00000466624 ODF2LQ9ULJ1 636 aa17.75■□□□□ 0.43
GPC1-207ENST00000466624 GADD45BO75293 160 aaPredicted RBP17.74■□□□□ 0.43
GPC1-207ENST00000466624 ZNF202O95125 648 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 RAG1P15918 1043 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 POU5F1BQ06416 359 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 ZNF618Q5T7W0 954 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 CNNM4Q6P4Q7 775 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 LRRC8DQ7L1W4 858 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 ZNF410Q86VK4 478 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 TMEM143Q96AN5 459 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 C17orf75Q9HAS0 396 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 SERTAD1Q9UHV2 236 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 COL4A3BPQ9Y5P4 624 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 TRPV2Q9Y5S1 764 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 SQORQ9Y6N5 450 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 SCN5AQ14524 2016 aa17.74■□□□□ 0.43
GPC1-207ENST00000466624 RSPH10B2B2RC85 870 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 HIP1RO75146 1068 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 GPR32O75388 356 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 VTNP04004 478 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 MYL1P05976 194 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 IQCF3P0C7M6 154 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 RSPH10BP0C881 870 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 RFC2P35250 354 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 GPC3P51654 580 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 MAPK7Q13164 816 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 SNW1Q13573 536 aaKnown RBP17.73■□□□□ 0.43
GPC1-207ENST00000466624 DHX8Q14562 1220 aaKnown RBP17.73■□□□□ 0.43
GPC1-207ENST00000466624 LONRF3Q496Y0 759 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 FAM102BQ5T8I3 360 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 MFSD5Q6N075 450 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 KRBA2Q6ZNG9 492 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 PRPF31Q8WWY3 499 aaKnown RBP17.73■□□□□ 0.43
GPC1-207ENST00000466624 CCDC34Q96HJ3 373 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 TIGD1Q96MW7 591 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 CELF4Q9BZC1 486 aaKnown RBP17.73■□□□□ 0.43
GPC1-207ENST00000466624 PPP1R12CQ9BZL4 782 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 POLR3FQ9H1D9 316 aaPredicted RBP17.73■□□□□ 0.43
GPC1-207ENST00000466624 WNT8AQ9H1J5 351 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 LMBRD1Q9NUN5 540 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 KCNG1Q9UIX4 513 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 CDY2AQ9Y6F7 541 aa17.73■□□□□ 0.43
GPC1-207ENST00000466624 UMODL1Q5DID0 1318 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 MYMKA6NI61 221 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 CHRNA1P02708 482 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 CTSHP09668 335 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 GLRA2P23416 452 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 CYP2C18P33260 490 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 ZNF131P52739 623 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 CRYBB1P53674 252 aaPredicted RBP17.72■□□□□ 0.43
GPC1-207ENST00000466624 NLRP11P59045 1033 aaKnown RBP17.72■□□□□ 0.43
GPC1-207ENST00000466624 LAMTOR4Q0VGL1 99 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 GIT2Q14161 759 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 TFDP1Q14186 410 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 PPP2R5AQ15172 486 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 KANK3Q6NY19 840 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 FAM43BQ6ZT52 329 aaPredicted RBP17.72■□□□□ 0.43
GPC1-207ENST00000466624 RHPN2Q8IUC4 686 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 DAW1Q8N136 415 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 TMEM199Q8N511 208 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 ASAP3Q8TDY4 903 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 DDX12PQ92771 950 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 REEP2Q9BRK0 252 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 NFKBIZQ9BYH8 718 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 ADAMTS10Q9H324 1103 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 GPRC5CQ9NQ84 441 aa17.72■□□□□ 0.43
GPC1-207ENST00000466624 KRT18P05783 430 aaKnown RBP17.71■□□□□ 0.43
GPC1-207ENST00000466624 ITGB8P26012 769 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 NAMPTP43490 491 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 MLLT1Q03111 559 aaPredicted RBP17.71■□□□□ 0.43
GPC1-207ENST00000466624 TMEM62Q0P6H9 643 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 TPRNQ4KMQ1 711 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 MAEAQ7L5Y9 396 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 IFNLR1Q8IU57 520 aaPredicted RBP17.71■□□□□ 0.43
GPC1-207ENST00000466624 ELOA2Q8IYF1 753 aaPredicted RBP17.71■□□□□ 0.43
GPC1-207ENST00000466624 USP38Q8NB14 1042 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 CNNM3Q8NE01 707 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 DNAJC19Q96DA6 116 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 IFT74Q96LB3 600 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 C7orf25Q9BPX7 421 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 TRIM9Q9C026 710 aa17.71■□□□□ 0.43
GPC1-207ENST00000466624 FRMD3A2A2Y4 597 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 TBCAO75347 108 aaKnown RBP17.7■□□□□ 0.42
GPC1-207ENST00000466624 NR1I2O75469 434 aa17.7■□□□□ 0.42
GPC1-207ENST00000466624 CXCL10P02778 98 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms