RNA–Protein interactions for RNA: ENST00000464139.5

TUBGCP3-204, Transcript of tubulin gamma complex associated protein 3, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP3, Length 2,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP3-204ENST00000464139 TISP43B9A030 160 aa22.24■■□□□ 1.15
TUBGCP3-204ENST00000464139 PHACTR2O75167 634 aa22.24■■□□□ 1.15
TUBGCP3-204ENST00000464139 PPP1R37O75864 691 aa22.24■■□□□ 1.15
TUBGCP3-204ENST00000464139 MYCLP12524 364 aaPredicted RBP22.24■■□□□ 1.15
TUBGCP3-204ENST00000464139 SPP2Q13103 211 aa22.24■■□□□ 1.15
TUBGCP3-204ENST00000464139 STRA6Q9BX79 667 aa22.24■■□□□ 1.15
TUBGCP3-204ENST00000464139 ADAM21Q9UKJ8 722 aa22.24■■□□□ 1.15
TUBGCP3-204ENST00000464139 EXOC3O60645 756 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 VCAM1P19320 739 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 BAG6P46379 1132 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 CFAP221Q4G0U5 840 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 C10orf76Q5T2E6 689 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 PCIF1Q9H4Z3 704 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 ZBTB7AO95365 584 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 NOP2P46087 812 aaKnown RBP22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 RNASE9P60153 205 aaKnown RBP22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 PTPROQ16827 1216 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 DALRD3Q5D0E6 543 aaKnown RBP22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 NIPA1Q7RTP0 329 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 SELENOOQ9BVL4 669 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 FAN1Q9Y2M0 1017 aa22.23■■□□□ 1.15
TUBGCP3-204ENST00000464139 RARRES1P49788 294 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 TNFAIP1Q13829 316 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 TBC1D10BQ4KMP7 808 aaPredicted RBP22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 RPAP3Q9H6T3 665 aaPredicted RBP22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 DNAJC12Q9UKB3 198 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 PPP1R9AQ9ULJ8 1098 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 HPCAL4Q9UM19 191 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 CTDP1Q9Y5B0 961 aaPredicted RBP22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 DDX3XO00571 662 aaKnown RBP eCLIP22.22■■□□□ 1.155e-7■■■■■ 27.4
TUBGCP3-204ENST00000464139 CTNND1O60716 968 aaKnown RBP22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 ATP9AO75110 1047 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 QARSP47897 775 aaKnown RBP22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 ZNF280AP59817 542 aaPredicted RBP22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 PGM5Q15124 567 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 UGCGQ16739 394 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 SLC16A10Q8TF71 515 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 WNK4Q96J92 1243 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 PPP1R1BQ9UD71 204 aaPredicted RBP22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 BCS1LQ9Y276 419 aa22.22■■□□□ 1.15
TUBGCP3-204ENST00000464139 EVI5O60447 810 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 STAT1P42224 750 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 GHRHRQ02643 423 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 NSMFQ6X4W1 530 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 LARSQ9P2J5 1176 aaKnown RBP22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 FAM170AA1A519 330 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 NFKBIEO00221 500 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 FERP16591 822 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 DRAP1Q14919 205 aaPredicted RBP22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 HSP90B2PQ58FF3 399 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 NBPF12Q5TAG4 269 aaPredicted RBP22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 U2AF1L4Q8WU68 220 aaKnown RBP22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 TRERF1Q96PN7 1200 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 INTS2Q9H0H0 1204 aaKnown RBP22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 ACBD3Q9H3P7 528 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 VIPAS39Q9H9C1 493 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 NENFQ9UMX5 172 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 LOXHD1Q8IVV2 1947 aa22.21■■□□□ 1.15
TUBGCP3-204ENST00000464139 A0A0U1RQG5 324 aaPredicted RBP22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 BTNL10A8MVZ5 291 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 F8VZ95 297 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 BFSP1Q12934 665 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 C8orf74Q6P047 294 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 VPS36Q86VN1 386 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 MICALL2Q8IY33 904 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 GOLGA5Q8TBA6 731 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 RMDN3Q96TC7 470 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 PLEKHA4Q9H4M7 779 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 HACL1Q9UJ83 578 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 SOX5P35711 763 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 DLG4P78352 724 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 MYL7Q01449 175 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 AENQ8WTP8 325 aaKnown RBP22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 STK33Q9BYT3 514 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 STIM2Q9P246 746 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 DBR1Q9UK59 544 aaKnown RBP22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 FZD1Q9UP38 647 aa22.2■■□□□ 1.14
TUBGCP3-204ENST00000464139 YWHABP31946 246 aaKnown RBP22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 GMPSP49915 693 aaPredicted RBP22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 PPP2R5AQ15172 486 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 RNF207Q6ZRF8 634 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 LNX1Q8TBB1 728 aaPredicted RBP22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 GPRC5CQ9NQ84 441 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 RIPK3Q9Y572 518 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 GJA3Q9Y6H8 435 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 ZBED4O75132 1171 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 TGFB2P61812 414 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 SLC9A9Q8IVB4 645 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 ZSWIM2Q8NEG5 633 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 ATG4CQ96DT6 458 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 CCDC43Q96MW1 224 aaKnown RBP22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 CBWD1Q9BRT8 395 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 GPR88Q9GZN0 384 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 TBC1D22BQ9NU19 505 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 RNF14Q9UBS8 474 aa22.19■■□□□ 1.14
TUBGCP3-204ENST00000464139 ZC3H4Q9UPT8 1303 aaKnown RBP22.18■■□□□ 1.14
TUBGCP3-204ENST00000464139 TESPA1A2RU30 521 aaPredicted RBP22.18■■□□□ 1.14
TUBGCP3-204ENST00000464139 BACH1O14867 736 aa22.18■■□□□ 1.14
TUBGCP3-204ENST00000464139 H2AFZP0C0S5 128 aa22.18■■□□□ 1.14
TUBGCP3-204ENST00000464139 ARHGAP44Q17R89 818 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms