RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 FTHL17Q9BXU8 183 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 CELF4Q9BZC1 486 aaKnown RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 C2orf40Q9H1Z8 148 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 IL23AQ9NPF7 189 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 LARSQ9P2J5 1176 aaKnown RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 SUCLA2Q9P2R7 463 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 WRAP73Q9P2S5 460 aaPredicted RBP7.08□□□□□ -1.28
SF3B1-206ENST00000462613 USP25Q9UHP3 1055 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 PCDHA7Q9UN72 937 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 COL4A3BPQ9Y5P4 624 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 CDY2AQ9Y6F7 541 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 GBF1Q92538 1859 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 CITO14578 2027 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 BRCA2P51587 3418 aa7.08□□□□□ -1.28
SF3B1-206ENST00000462613 IGKV6-21A0A0C4DH24 114 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 LRRIQ4A6NIV6 560 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 ZBBXA8MT70 800 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 ZBTB42B2RXF5 422 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 RPS6KA5O75582 802 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 BAIAP3O94812 1187 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 ERLIN2O94905 339 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 FAM13AO94988 1023 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 STBD1O95210 358 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 FGBP02675 491 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 VTNP04004 478 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 CSF2RAP15509 400 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 ZSCAN20P17040 1043 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 CYP11B2P19099 503 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 SCP2P22307 547 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 EIF4BP23588 611 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 CMA1P23946 247 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 ABCD1P33897 745 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 MAGEA10P43363 369 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 KCNJ6P48051 423 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 CRYBB1P53674 252 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 SMTNP53814 917 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 GRIN1Q05586 938 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 TMEM62Q0P6H9 643 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 NFX1Q12986 1120 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 DMP1Q13316 513 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 GRB10Q13322 594 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 IKBKEQ14164 716 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 PCBP1Q15365 356 aaKnown RBP eCLIP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 TMEM132AQ24JP5 1023 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 TMEM119Q4V9L6 283 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 FAM26DQ5JW98 314 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 CNKSR3Q6P9H4 555 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 RUFY4Q6ZNE9 571 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 TSHZ1Q6ZSZ6 1077 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 MAEAQ7L5Y9 396 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 SRGAP1Q7Z6B7 1085 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 GPBP1Q86WP2 473 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 KIAA0319LQ8IZA0 1049 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 PDILTQ8N807 584 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 RNF149Q8NC42 400 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 SLC17A8Q8NDX2 589 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 DEPTORQ8TB45 409 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 MRPS27Q92552 414 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 DHX38Q92620 1227 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 RAD54LQ92698 747 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 CCDC47Q96A33 483 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 TMEM143Q96AN5 459 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 SCLYQ96I15 445 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 NLRP4Q96MN2 994 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 OSMRQ99650 979 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 IFIH1Q9BYX4 1025 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 POLR3FQ9H1D9 316 aaPredicted RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 WNT8AQ9H1J5 351 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 C17orf75Q9HAS0 396 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 HOOK1Q9UJC3 728 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 KCNH3Q9ULD8 1083 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 ODF2LQ9ULJ1 636 aa7.07□□□□□ -1.28
SF3B1-206ENST00000462613 TDRD15B5MCY1 1934 aaKnown RBP7.07□□□□□ -1.28
SF3B1-206ENST00000462613 UMODL1Q5DID0 1318 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 ABHD14A-ACY1A0A1B0GW23 586 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 A0A1W2PPC1 479 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 A0A1W2PQ27 194 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 A0A1W2PQ64 194 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 A0A1W2PQD8 194 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 DENND3A2RUS2 1198 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 CCDC169A6NNP5 214 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 ZBTB39O15060 712 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 POLR2DO15514 142 aaKnown RBP7.06□□□□□ -1.28
SF3B1-206ENST00000462613 SRGAP2CP0DJJ0 459 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 GHRP10912 638 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 GUCY2CP25092 1073 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 BMP8BP34820 402 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 SYKP43405 635 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 GPC3P51654 580 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 EFNA5P52803 228 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 POU5F1BQ06416 359 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 LAMTOR4Q0VGL1 99 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 HIC1Q14526 733 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 KIZQ2M2Z5 673 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 TRIM71Q2Q1W2 868 aaKnown RBP7.06□□□□□ -1.28
SF3B1-206ENST00000462613 TPRNQ4KMQ1 711 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 FBXO47Q5MNV8 452 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 AXDND1Q5T1B0 1012 aaPredicted RBP7.06□□□□□ -1.28
SF3B1-206ENST00000462613 RESP18Q5W5W9 173 aa7.06□□□□□ -1.28
SF3B1-206ENST00000462613 RINT1Q6NUQ1 792 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms