RNA–Protein interactions for RNA: ENST00000461098.1

HCFC1-204, Transcript of host cell factor C1, humanhuman

TSL 5

Gene HCFC1, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-204ENST00000461098 DDX39AO00148 427 aaKnown RBP13.49□□□□□ -0.25
HCFC1-204ENST00000461098 SH2B2O14492 632 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-204ENST00000461098 BACH1O14867 736 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 CHMLP26374 656 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 METAP2P50579 478 aaKnown RBP eCLIP13.49□□□□□ -0.252e-15■□□□□ 8.4
HCFC1-204ENST00000461098 BCAR1P56945 870 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 TDGQ13569 410 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 WWC2Q6AWC2 1192 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 VPS52Q8N1B4 723 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 CCDC82Q8N4S0 544 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 HELQQ8TDG4 1101 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 BCL7CQ8WUZ0 217 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-204ENST00000461098 MTA3Q9BTC8 594 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 RWDD1Q9H446 243 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-204ENST00000461098 DZANK1Q9NVP4 752 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 DUSP12Q9UNI6 340 aa13.49□□□□□ -0.25
HCFC1-204ENST00000461098 KMT2BQ9UMN6 2715 aaPredicted RBP13.49□□□□□ -0.25
HCFC1-204ENST00000461098 NCOR2Q9Y618 2525 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 IGLV3-22A0A075B6J6 115 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 A0A0U1RQF3 1178 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 FAM86B1E9PN63 330 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 PRC1O43663 620 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 FAM86B2P0C5J1 330 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 CTSAP10619 480 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 SREBF1P36956 1147 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 CLK2P49760 499 aaKnown RBP13.48□□□□□ -0.25
HCFC1-204ENST00000461098 CLCN3P51790 818 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 NLRP11P59045 1033 aaKnown RBP13.48□□□□□ -0.25
HCFC1-204ENST00000461098 FAM160B1Q5W0V3 765 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 TMC5Q6UXY8 1006 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 TMTC3Q6ZXV5 915 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 NIPA1Q7RTP0 329 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 HEATR3Q7Z4Q2 680 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 GPR149Q86SP6 731 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 RAB11FIP4Q86YS3 637 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 ABI1Q8IZP0 508 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 SIX5Q8N196 739 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 METTL13Q8N6R0 699 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 BBXQ8WY36 941 aaPredicted RBP13.48□□□□□ -0.25
HCFC1-204ENST00000461098 MAP4K1Q92918 833 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 VN1R3Q9BXE9 311 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 ANO3Q9BYT9 981 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 KCNK12Q9HB15 430 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 RIC8AQ9NPQ8 531 aa13.48□□□□□ -0.25
HCFC1-204ENST00000461098 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 KRBA1A5PL33 1030 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 NARSO43776 548 aaKnown RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 N4BP1O75113 896 aaKnown RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 ZSCAN20P17040 1043 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 FGFR4P22455 802 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 EIF4BP23588 611 aaKnown RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 ALDH7A1P49419 539 aaKnown RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 MIS18BP1Q6P0N0 1132 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 DDX53Q86TM3 631 aaKnown RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 FANCBQ8NB91 859 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 RNF169Q8NCN4 708 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 CRYGNQ8WXF5 182 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 ZNF668Q96K58 619 aaPredicted RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 RTP3Q9BQQ7 232 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 MYH9P35579 1960 aaKnown RBP13.47□□□□□ -0.25
HCFC1-204ENST00000461098 WDR81Q562E7 1941 aa13.47□□□□□ -0.25
HCFC1-204ENST00000461098 OTOGLQ3ZCN5 2332 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 SGSM2O43147 1006 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 FOSP01100 380 aaPredicted RBP13.46□□□□□ -0.25
HCFC1-204ENST00000461098 LMNAP02545 664 aaKnown RBP13.46□□□□□ -0.25
HCFC1-204ENST00000461098 CA8P35219 290 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 LIFRP42702 1097 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 POLGP54098 1239 aaPredicted RBP13.46□□□□□ -0.25
HCFC1-204ENST00000461098 FUT2Q10981 343 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 EFCAB12Q6NXP0 572 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 TRMT1LQ7Z2T5 733 aaKnown RBP13.46□□□□□ -0.25
HCFC1-204ENST00000461098 KIAA2013Q8IYS2 634 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 TMTC2Q8N394 836 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 LRRC71Q8N4P6 559 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 TMEM169Q96HH4 297 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 IGSF21Q96ID5 467 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 SEMA4AQ9H3S1 761 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 CEP250Q9BV73 2442 aa13.46□□□□□ -0.25
HCFC1-204ENST00000461098 EPG5Q9HCE0 2579 aa13.46□□□□□ -0.26
HCFC1-204ENST00000461098 FANCMQ8IYD8 2048 aa13.46□□□□□ -0.26
HCFC1-204ENST00000461098 CNTNAP5Q8WYK1 1306 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 CCDC69A6NI79 296 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 IPO5O00410 1097 aaKnown RBP13.45□□□□□ -0.26
HCFC1-204ENST00000461098 ADAMTS3O15072 1205 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 B4GALT3O60512 393 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 CALM1P0DP23 149 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 CALM2P0DP24 149 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 CALM3P0DP25 149 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 DARSP14868 501 aaKnown RBP13.45□□□□□ -0.26
HCFC1-204ENST00000461098 GPC3P51654 580 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 CLCN4P51793 760 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 AAMPQ13685 434 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 GIT2Q14161 759 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 PTPN14Q15678 1187 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 CASC1Q6TDU7 716 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 NFXL1Q6ZNB6 911 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 OTOP3Q7RTS5 596 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 DGLUCYQ7Z3D6 616 aa13.45□□□□□ -0.26
HCFC1-204ENST00000461098 CABP7Q86V35 215 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms